Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS4BO75351 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 NXF4-202ENST00000416098 1465 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 RNU4-22P-201ENST00000411058 166 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS4BO75351 REREP1Y-201ENST00000422655 198 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS4BO75351 ETF1P3-201ENST00000430422 1160 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS4BO75351 AC084290.1-201ENST00000434995 374 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS4BO75351 PA2G4P6-201ENST00000438325 1197 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VPS4BO75351 REREP2Y-201ENST00000439103 200 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 MTCYBP12-201ENST00000440559 1134 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AL663074.2-201ENST00000440621 479 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 SETD6P1-201ENST00000444575 317 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.73□□□□□ -1.49
VPS4BO75351 ZNF619P1-201ENST00000446539 752 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS4BO75351 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 RPL12P39-201ENST00000455456 496 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 RNU1-88P-201ENST00000459274 128 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 RN7SL610P-201ENST00000463845 291 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 NDUFA5P9-201ENST00000472609 340 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AC107398.1-201ENST00000486904 505 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VPS4BO75351 RPS12P31-201ENST00000491419 398 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 OR7E157P-201ENST00000494376 911 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS4BO75351 Y_RNA.667-201ENST00000516212 107 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS4BO75351 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS4BO75351 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS4BO75351 AC023050.2-201ENST00000544968 387 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS4BO75351 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS4BO75351 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS4BO75351 SNORD95-201ENST00000579879 68 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 AC090236.2-201ENST00000587933 1101 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS4BO75351 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 AC079610.2-201ENST00000604818 690 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.73□□□□□ -1.49
VPS4BO75351 AC019131.2-201ENST00000609071 870 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AC096708.4-201ENST00000620563 552 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AC079416.3-201ENST00000624479 549 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS4BO75351 AC090897.3-201ENST00000636973 1157 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 AP003399.1-201ENST00000637534 361 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS4BO75351 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.73□□□□□ -1.49
VPS4BO75351 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 AC140134.1-201ENST00000511830 3544 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS4BO75351 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.73□□□□□ -1.49
VPS4BO75351 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VPS4BO75351 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS4BO75351 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS4BO75351 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 AC245100.2-201ENST00000454544 1679 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 AL592429.1-201ENST00000403909 1473 ntBASIC5.72□□□□□ -1.49
VPS4BO75351 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
VPS4BO75351 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS4BO75351 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms