Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 AL606537.1-201ENST00000607258 2011 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AL137141.1-201ENST00000624622 4836 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
TRIM38O00635 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 MYL6P5-201ENST00000412707 459 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 AC005189.1-201ENST00000431286 310 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 CLUHP1-201ENST00000435012 1190 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 MTND2P40-201ENST00000436718 841 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 AC097499.1-201ENST00000444277 208 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 FRG2FP-204ENST00000453982 852 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 RPL12P39-201ENST00000455456 496 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 RN7SL515P-201ENST00000463999 297 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 GLUD1P3-202ENST00000508551 200 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 AC078899.1-201ENST00000521432 1185 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AC104115.2-201ENST00000523026 687 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 AP002373.2-201ENST00000541631 1060 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM38O00635 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 SS18L2P2-201ENST00000583960 235 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM38O00635 BNIP3P38-201ENST00000601117 544 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 SUMO2P15-201ENST00000604285 278 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AL133481.2-203ENST00000607558 139 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 RMST_10.1-201ENST00000616309 154 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AL356863.1-201ENST00000623378 1080 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 AC004808.1-201ENST00000627671 721 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 AL445984.1-201ENST00000637834 659 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 OR11H2-202ENST00000641517 1085 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.74□□□□□ -1.49
TRIM38O00635 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
TRIM38O00635 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.74□□□□□ -1.49
TRIM38O00635 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.74□□□□□ -1.49
TRIM38O00635 AC125336.1-201ENST00000508893 2827 ntBASIC5.74□□□□□ -1.49
TRIM38O00635 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
TRIM38O00635 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
TRIM38O00635 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 METTL21EP-201ENST00000298105 713 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 RNU6-481P-201ENST00000384194 107 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 RNU6-185P-201ENST00000384421 107 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 MIR320B1-201ENST00000390209 79 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 NPM1P4-201ENST00000414095 812 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AL596448.1-201ENST00000415024 392 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM38O00635 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM38O00635 DPY19L1P2-201ENST00000426647 915 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC099677.3-201ENST00000427081 395 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 VTI1BP4-201ENST00000427516 527 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM38O00635 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM38O00635 MTCO1P52-201ENST00000433928 531 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 NPM1P18-201ENST00000434232 732 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM38O00635 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM38O00635 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM38O00635 SDC4P-201ENST00000453285 601 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AL122001.1-201ENST00000457027 370 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.73□□□□□ -1.49
TRIM38O00635 RN7SL72P-201ENST00000460697 269 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 AC090602.1-201ENST00000469695 252 ntBASIC5.73□□□□□ -1.49
TRIM38O00635 RPS17P15-201ENST00000475609 349 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms