Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL390334.1-201ENST00000556395 450 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1AO00322 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1AO00322 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
UPK1AO00322 AL672167.1-205ENST00000641112 3080 ntBASIC4.67□□□□□ -1.66
UPK1AO00322 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1AO00322 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1AO00322 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.67□□□□□ -1.66
UPK1AO00322 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.66□□□□□ -1.66
UPK1AO00322 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
UPK1AO00322 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
UPK1AO00322 U8.4-201ENST00000363626 134 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
UPK1AO00322 RNU1-106P-201ENST00000384382 164 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1AO00322 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1AO00322 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.66□□□□□ -1.66
UPK1AO00322 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.66□□□□□ -1.66
UPK1AO00322 RHOT1P3-201ENST00000436571 331 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1AO00322 EEF1B2P5-201ENST00000444820 548 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.66□□□□□ -1.66
UPK1AO00322 OR2AF1P-201ENST00000454899 889 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 AC005532.2-201ENST00000467154 373 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 RN7SL799P-201ENST00000475891 298 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 RN7SL244P-201ENST00000493405 297 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 AC008953.1-201ENST00000497334 318 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.66□□□□□ -1.66
UPK1AO00322 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
UPK1AO00322 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1AO00322 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1AO00322 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 AC092490.3-201ENST00000545370 572 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1AO00322 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 SETP1-201ENST00000556014 845 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.66□□□□□ -1.66
UPK1AO00322 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1AO00322 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 AC006116.3-201ENST00000592968 361 ntBASIC4.66□□□□□ -1.66
UPK1AO00322 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.66□□□□□ -1.66
UPK1AO00322 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
UPK1AO00322 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1AO00322 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1AO00322 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.65□□□□□ -1.66
UPK1AO00322 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.65□□□□□ -1.66
UPK1AO00322 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
UPK1AO00322 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
UPK1AO00322 AC009643.2-201ENST00000603543 1448 ntBASIC4.65□□□□□ -1.66
UPK1AO00322 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
UPK1AO00322 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
UPK1AO00322 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.65□□□□□ -1.66
UPK1AO00322 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.65□□□□□ -1.66
UPK1AO00322 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
UPK1AO00322 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
UPK1AO00322 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
UPK1AO00322 SNORA73.1-201ENST00000363107 205 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 RNA5SP455-201ENST00000365190 119 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 RN7SKP199-201ENST00000410325 305 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.65□□□□□ -1.67
UPK1AO00322 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.65□□□□□ -1.67
UPK1AO00322 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.65□□□□□ -1.67
UPK1AO00322 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.65□□□□□ -1.67
UPK1AO00322 NMNAT1P2-201ENST00000435192 860 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.65□□□□□ -1.67
UPK1AO00322 AC073052.1-201ENST00000440417 714 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 SEPT7P3-201ENST00000455017 621 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.65□□□□□ -1.67
UPK1AO00322 DEFB109F-201ENST00000491870 277 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 AC006499.3-201ENST00000506077 748 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 AC026688.1-201ENST00000520639 1168 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UPK1AO00322 HAUS8P1-201ENST00000549005 542 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.65□□□□□ -1.67
UPK1AO00322 AC105036.1-201ENST00000566222 271 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 MIR3691-201ENST00000578066 90 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 MIR4691-201ENST00000583764 85 ntBASIC4.65□□□□□ -1.67
UPK1AO00322 EIF1P5-201ENST00000585002 234 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms