Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC188H7C350 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC188H7C350 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC188H7C350 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CCDC188H7C350 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC188H7C350 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 MTCYBP29-201ENST00000436327 1006 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC188H7C350 CYCSP34-201ENST00000458172 304 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 RPL5P13-201ENST00000462840 709 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 RN7SL51P-201ENST00000468230 285 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 AC090686.1-201ENST00000481577 749 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC188H7C350 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC188H7C350 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC188H7C350 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC188H7C350 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC188H7C350 TOMM20P1-201ENST00000534518 427 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.33□□□□□ -1.56
CCDC188H7C350 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC188H7C350 AL049830.4-201ENST00000555149 351 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 MIR4675-201ENST00000577898 77 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 RBM22P1-201ENST00000578589 1214 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 AC067773.1-201ENST00000603284 1094 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 TAS2R6P-201ENST00000605022 826 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 AC009032.1-201ENST00000617574 431 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 AC074140.1-201ENST00000621617 208 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 AC091948.2-201ENST00000636510 279 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC188H7C350 CASC19-281ENST00000642118 1554 ntBASIC5.33□□□□□ -1.56
CCDC188H7C350 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC188H7C350 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC188H7C350 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC188H7C350 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC188H7C350 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC188H7C350 DDX6P1-205ENST00000441966 1436 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC188H7C350 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC188H7C350 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC188H7C350 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CCDC188H7C350 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCDC188H7C350 U3.3-201ENST00000362986 216 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CCDC188H7C350 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC188H7C350 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 SNORA2.3-201ENST00000383920 135 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 OR1F12-201ENST00000402365 945 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.32□□□□□ -1.56
CCDC188H7C350 RN7SKP125-201ENST00000410481 302 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 RN7SKP286-201ENST00000410894 299 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 RN7SKP97-201ENST00000410966 333 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 GABARAPL3-201ENST00000412799 354 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC188H7C350 AC012519.1-201ENST00000424588 610 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC188H7C350 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC188H7C350 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC188H7C350 MTND2P21-201ENST00000436242 1042 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC188H7C350 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC188H7C350 AL627224.1-201ENST00000448334 444 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AC112206.1-201ENST00000468416 477 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AC020779.1-201ENST00000478757 796 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AC020890.1-201ENST00000491837 504 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AC021087.2-201ENST00000504656 1203 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 HAUS1P1-201ENST00000505275 832 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 BTG4P1-201ENST00000510421 183 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC188H7C350 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC188H7C350 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCDC188H7C350 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC188H7C350 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC188H7C350 NDUFA5P11-201ENST00000567995 343 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AC010547.6-201ENST00000571789 193 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC188H7C350 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC188H7C350 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 AC004808.2-201ENST00000627965 773 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC188H7C350 AC135068.12-201ENST00000637370 931 ntBASIC5.32□□□□□ -1.56
CCDC188H7C350 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC188H7C350 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC188H7C350 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC188H7C350 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC188H7C350 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms