Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 COPS8P2-201ENST00000473228 627 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC090686.1-201ENST00000481577 749 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 RPS21P4-201ENST00000487122 248 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC024558.1-201ENST00000505008 528 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 PGAM1P13-201ENST00000507497 754 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC105031.1-201ENST00000518550 476 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AC095055.1-201ENST00000603472 1113 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 RNF138P2-201ENST00000603490 592 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 BNIP3P35-201ENST00000604530 490 ntBASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
HLA-DRB4X5D2U9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.8
HLA-DRB4X5D2U9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
HLA-DRB4X5D2U9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HLA-DRB4X5D2U9 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HLA-DRB4X5D2U9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HLA-DRB4X5D2U9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 RN7SKP113-201ENST00000363891 295 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 MIR600-201ENST00000385007 98 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 MIR1182-201ENST00000408363 97 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 RPL35AP24-201ENST00000413846 330 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC079355.1-201ENST00000421770 223 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 EI24P4-201ENST00000423683 1078 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 MRPL35P2-201ENST00000448009 511 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AL606490.1-201ENST00000452266 765 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC091180.1-201ENST00000462104 372 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 RPL5P16-201ENST00000471467 790 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 RPS4XP1-201ENST00000482189 787 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 OR9N1P-201ENST00000491296 333 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 NIFKP7-201ENST00000503365 834 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC134349.2-201ENST00000535136 910 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC004825.1-201ENST00000555068 586 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC084759.1-201ENST00000561168 290 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 MIR3176-201ENST00000582210 90 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AF117829.2-201ENST00000619538 361 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC004808.2-201ENST00000627965 773 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC027228.2-201ENST00000567141 2154 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 MAPK10-349ENST00000641767 3661 ntBASIC3.83□□□□□ -1.8
HLA-DRB4X5D2U9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 Z95327.2-201ENST00000414579 1873 ntBASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 AC235565.1-201ENST00000456962 1325 ntBASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 U3.2-201ENST00000362981 210 ntBASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 RNU1-43P-201ENST00000365052 165 ntBASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 RN7SKP16-201ENST00000410180 299 ntBASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DRB4X5D2U9 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms