Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU6-549P-201ENST00000384433 107 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC246680.2-201ENST00000422106 389 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 GTF2IP2-201ENST00000424290 697 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 EEF1A1P39-201ENST00000440791 250 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 CASP3P1-201ENST00000446037 609 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC244505.3-201ENST00000454598 187 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 OSTCP1-201ENST00000455507 450 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 RPS27AP2-201ENST00000457576 465 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC008629.2-201ENST00000503783 483 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC008565.1-201ENST00000509046 885 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC105313.1-201ENST00000509121 353 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 WBP1LP3-201ENST00000523033 208 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC095057.3-201ENST00000567102 1157 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AL163952.1-202ENST00000569625 600 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC061975.8-201ENST00000587058 721 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AP001267.4-201ENST00000602598 545 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC107952.2-201ENST00000606048 486 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC013470.4-201ENST00000619978 986 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AP000550.3-201ENST00000637734 379 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 AC079776.5-201ENST00000641920 211 ntBASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PCDHB1Q9Y5F3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 CDC27P2-201ENST00000425026 1922 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 RNU4-92P-201ENST00000363783 136 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 RNU6-244P-201ENST00000391028 104 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 MCTS2P-201ENST00000394552 546 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 ATP5F1P2-201ENST00000398143 760 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 RPS27AP11-201ENST00000402798 447 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 FCF1P5-201ENST00000406490 482 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 RPL35AP3-201ENST00000414680 288 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 BX679664.2-201ENST00000439282 283 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AL663074.2-201ENST00000440621 479 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AL353093.1-201ENST00000441292 436 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 OR6K5P-201ENST00000447050 945 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AP000563.1-201ENST00000490865 758 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 DEFB130C-202ENST00000530001 230 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC022404.1-201ENST00000555320 273 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 ATP5F1P7-201ENST00000567330 760 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC040904.1-201ENST00000590850 223 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 COX6CP7-201ENST00000597056 208 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AL136131.3-201ENST00000607600 188 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AL021707.7-201ENST00000607991 416 ntBASIC5.88□□□□□ -1.47
PCDHB1Q9Y5F3 AC013468.1-201ENST00000608680 598 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms