Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AP001496.3-201ENST00000580230 913 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 RN7SL176P-201ENST00000580352 264 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC005726.4-201ENST00000582858 458 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 BNIP3P7-201ENST00000605641 516 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC005828.7-201ENST00000607331 556 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 uc_338.29-201ENST00000615099 168 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 MIR8069-1-201ENST00000616627 86 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC009237.17-201ENST00000618111 748 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL133370.2-201ENST00000619934 439 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL023881.1-201ENST00000621088 301 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 MIR8069-2-201ENST00000621412 86 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC002044.3-201ENST00000623314 541 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC129915.3-201ENST00000634128 948 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC114786.1-201ENST00000512892 1415 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 RNA5SP273-201ENST00000362484 113 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 RN7SKP250-201ENST00000363924 321 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 RNU1-74P-201ENST00000384108 171 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 SNORD65-201ENST00000391079 73 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC013442.1-201ENST00000397347 228 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AL136131.1-201ENST00000406079 803 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 RNU6-564P-201ENST00000410983 104 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 MTCYBP7-201ENST00000419540 1134 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AL133173.1-201ENST00000423458 397 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 RPS11P7-201ENST00000442125 465 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 RAD1P2-201ENST00000446414 663 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AL035551.1-201ENST00000446931 348 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 CYCSP34-201ENST00000458172 304 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC091180.1-201ENST00000462104 372 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 RPL23AP37-201ENST00000479658 549 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC021006.1-201ENST00000489849 553 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AP004607.2-201ENST00000533949 322 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC079905.1-201ENST00000549280 475 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC002310.3-201ENST00000569728 723 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC009704.2-201ENST00000618739 483 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 TEX41-279ENST00000629149 609 ntTSL 5 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 SAMMSON-209ENST00000641222 1100 ntBASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KCNIP3Q9Y2W7 AC132825.1-201ENST00000463573 2247 ntBASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.31□□□□□ -1.72
KCNIP3Q9Y2W7 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms