Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RPL7P31-201ENST00000450192 724 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 VPS25P1-201ENST00000455691 508 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 RPS4XP12-201ENST00000461747 709 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 PSAT1P4-201ENST00000466500 526 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 RPL7P24-201ENST00000493052 752 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 HMGB1P44-201ENST00000508597 572 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 OR52H2P-201ENST00000514607 902 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 PCMTD1P2-201ENST00000565017 355 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 MIR4701-201ENST00000583094 63 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AL035410.2-201ENST00000604963 864 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AL049634.3-201ENST00000604968 457 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 RNU6-84P-201ENST00000607737 102 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AC127024.6-201ENST00000621598 424 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AC006840.1-201ENST00000623069 542 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 AC024023.1-201ENST00000624530 922 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 DDX18P6-201ENST00000450119 1997 ntBASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
ZC3H4Q9UPT8 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 RNU6-501P-201ENST00000364072 100 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 Y_RNA.372-201ENST00000365599 102 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 SNORD65.1-201ENST00000390889 71 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 MTND5P14-201ENST00000441481 1267 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC110749.1-201ENST00000462007 357 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 MTND5P5-201ENST00000503764 376 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 CENPUP1-201ENST00000526649 1202 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC063977.5-201ENST00000601044 974 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC092266.1-201ENST00000610958 165 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC022467.1-201ENST00000614738 749 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AC007342.8-201ENST00000623278 678 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AP002505.2-201ENST00000623585 696 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 SNORA16A-202ENST00000628458 135 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AL590763.1-201ENST00000398297 1545 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 AP003119.3-201ENST00000566747 4192 ntBASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
ZC3H4Q9UPT8 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.15□□□□□ -1.11
ZC3H4Q9UPT8 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.15□□□□□ -1.11
ZC3H4Q9UPT8 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.15□□□□□ -1.11
ZC3H4Q9UPT8 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
ZC3H4Q9UPT8 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC8.15□□□□□ -1.11
ZC3H4Q9UPT8 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
ZC3H4Q9UPT8 AC083806.2-201ENST00000617795 2685 ntBASIC8.15□□□□□ -1.11
ZC3H4Q9UPT8 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
ZC3H4Q9UPT8 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
ZC3H4Q9UPT8 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ZC3H4Q9UPT8 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC8.14□□□□□ -1.11
ZC3H4Q9UPT8 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.14□□□□□ -1.11
ZC3H4Q9UPT8 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
ZC3H4Q9UPT8 Z99496.1-201ENST00000469424 1477 ntBASIC8.14□□□□□ -1.11
ZC3H4Q9UPT8 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ZC3H4Q9UPT8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms