Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC137768.1-201ENST00000549998 553 ntBASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 PCNPP1-201ENST00000552501 511 ntBASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 AL034374.2-201ENST00000605281 548 ntBASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 AL391358.1-201ENST00000605342 190 ntBASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 AL731566.2-201ENST00000618971 317 ntBASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 ZNF652P1-201ENST00000442420 1309 ntBASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPC1L1Q9UHC9 AL360270.2-201ENST00000562952 5985 ntBASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 IRF5P1-201ENST00000504852 2164 ntBASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AC125257.1-201ENST00000560400 2930 ntBASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 RPS3AP53-201ENST00000454716 778 ntBASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AL359219.2-201ENST00000555184 348 ntBASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AC068790.7-201ENST00000602347 528 ntBASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
NPC1L1Q9UHC9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 LINC00993-201ENST00000420453 540 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 RPL12P43-201ENST00000420608 499 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 OR52J1P-201ENST00000450596 932 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 RPS29P33-201ENST00000456717 146 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 AC092324.1-201ENST00000468671 324 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 IGKV1-32-201ENST00000519290 311 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 AC005868.1-201ENST00000536421 331 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 AC007497.1-201ENST00000610421 561 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 AC244517.3-201ENST00000616254 1235 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 AC019206.1-201ENST00000621938 425 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 MTND5P12-201ENST00000502851 1449 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 AC012618.3-205ENST00000637896 1496 ntBASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
NPC1L1Q9UHC9 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 RNVU1-6-201ENST00000364688 164 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 U3.35-201ENST00000408405 208 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 RAB28P1-201ENST00000411517 641 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AC016397.1-201ENST00000412463 242 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 KATNBL1P2-201ENST00000433311 835 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 RN7SL558P-201ENST00000497468 299 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 MORF4L2P1-201ENST00000503761 858 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AC005000.1-201ENST00000536192 288 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AC079075.1-201ENST00000559543 878 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AL583832.1-201ENST00000603227 784 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 MIR378J-201ENST00000611988 109 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AC063976.2-201ENST00000425667 3556 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 AC125336.1-201ENST00000508893 2827 ntBASIC6.62□□□□□ -1.35
NPC1L1Q9UHC9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms