Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 MEMO1P5-201ENST00000604810 406 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 MIR6862-1-201ENST00000613016 70 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 MIR6862-2-201ENST00000614755 70 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TREX1Q9NSU2 AC005005.4-201ENST00000623789 16698 ntBASIC4.95□□□□□ -1.62
TREX1Q9NSU2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 OR9K1P-202ENST00000641111 3217 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 MTCO1P11-201ENST00000429111 1528 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 MTND5P23-201ENST00000430812 1655 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AC245100.2-201ENST00000454544 1679 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 U8.4-201ENST00000363626 134 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 BMS1P13-201ENST00000417301 885 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AL355433.1-201ENST00000422804 300 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AC000111.2-201ENST00000448200 210 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 RPL7AP10-201ENST00000481016 791 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 RN7SL97P-201ENST00000486780 299 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 RNA5SP92-201ENST00000516437 110 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 RNA5SP392-201ENST00000516905 112 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 OR10D4P-201ENST00000525892 951 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 BNIP3P1-201ENST00000547295 580 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 TVP23CP2-201ENST00000571473 623 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 CYCSP40-201ENST00000575927 294 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AC006116.3-201ENST00000592968 361 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AC093799.2-201ENST00000610062 578 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 AL139407.1-201ENST00000613826 1175 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 TMEM30CP-203ENST00000637814 1035 ntBASIC4.94□□□□□ -1.62
TREX1Q9NSU2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.94□□□□□ -1.62
TREX1Q9NSU2 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 CASC19-255ENST00000641733 1385 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 RNA5SP455-201ENST00000365190 119 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AL357515.1-201ENST00000402967 542 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AL356968.2-201ENST00000412769 1257 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AF186996.5-201ENST00000418098 904 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AL163193.1-201ENST00000444895 788 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AC005532.2-201ENST00000467154 373 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 OR9N1P-201ENST00000491296 333 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AC008953.1-201ENST00000497334 318 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 MRPS33P2-201ENST00000507850 322 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 RNA5SP249-201ENST00000516127 99 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 RNA5SP303-201ENST00000516192 130 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 RNA5SP34-201ENST00000516887 130 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 Y_RNA.719-201ENST00000517156 106 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AC084759.1-201ENST00000561168 290 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AL356752.1-201ENST00000615844 593 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AL138820.1-201ENST00000617901 5305 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 MIR6729-201ENST00000618194 65 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AF117829.2-201ENST00000619538 361 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 STX3-208ENST00000641815 3236 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms