Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC073916.1-201ENST00000545095 130 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC023968.1-201ENST00000560719 475 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC079171.1-201ENST00000568788 914 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC090616.1-201ENST00000583895 447 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC024255.1-201ENST00000614376 102 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 MIR4278-201ENST00000636094 69 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL603750.1-201ENST00000624216 1717 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC011369.2-201ENST00000624423 1567 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL391994.1-201ENST00000254724 282 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL133260.1-201ENST00000405720 405 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 MTCYBP38-201ENST00000417160 1123 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 GAPDHP19-201ENST00000431768 1005 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 ATP5F1P1-201ENST00000433775 569 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL645939.3-201ENST00000435408 225 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 NDUFS5P5-201ENST00000437256 321 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL121601.2-201ENST00000438019 707 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 USP9YP29-201ENST00000445112 563 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 COX4I1P2-201ENST00000447446 547 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 RPS18P1-201ENST00000447840 458 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 SNX18P26-201ENST00000458433 740 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 RPS7P10-201ENST00000464254 603 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC010285.3-201ENST00000511668 676 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 FABP5P5-201ENST00000515537 406 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 NPM1P5-201ENST00000557228 838 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC233702.7-202ENST00000582941 211 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC063977.7-201ENST00000594454 337 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC004805.3-201ENST00000603178 310 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 WBP1LP12-201ENST00000604449 331 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 NDUFB9P1-201ENST00000604683 510 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL451074.6-201ENST00000608512 729 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC097505.1-201ENST00000610199 565 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC012409.3-201ENST00000611343 981 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC013476.2-201ENST00000614456 459 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL031658.2-201ENST00000616850 651 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 FRG1HP-204ENST00000617940 757 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC109454.4-201ENST00000623411 649 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC095031.1-201ENST00000623685 672 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 SEPT14P19-203ENST00000633205 211 ntBASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AC132825.1-201ENST00000463573 2247 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms