Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 OR5M12P-201ENST00000423388 929 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 RPL35AP21-201ENST00000437667 333 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 MRPL35P2-201ENST00000448009 511 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 BTF3P6-201ENST00000448054 499 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AL691482.1-201ENST00000453255 87 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AL356981.1-201ENST00000454879 684 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 RPS18P6-201ENST00000476880 458 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 PCNPP1-201ENST00000552501 511 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC006363.1-201ENST00000603806 463 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC126915.2-201ENST00000610957 190 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
UPF3BQ9BZI7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6□□□□□ -1.45
UPF3BQ9BZI7 MTND5P12-201ENST00000502851 1449 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
UPF3BQ9BZI7 MTCO1P7-201ENST00000419523 1542 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
UPF3BQ9BZI7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 AL353625.1-202ENST00000366273 571 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6□□□□□ -1.45
UPF3BQ9BZI7 GNG5P5-201ENST00000420444 220 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6□□□□□ -1.45
UPF3BQ9BZI7 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 AC012339.2-201ENST00000523996 453 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 AL512310.9-201ENST00000553311 948 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 NDUFB4P11-201ENST00000560510 395 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 AGGF1P9-201ENST00000561884 913 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 AC015660.5-201ENST00000623238 564 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 TET1P1-201ENST00000426627 2301 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 AC120036.2-201ENST00000509729 1474 ntBASIC6□□□□□ -1.45
UPF3BQ9BZI7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6□□□□□ -1.45
UPF3BQ9BZI7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6□□□□□ -1.45
UPF3BQ9BZI7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 AC245028.1-201ENST00000423259 256 ntBASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 AL450023.3-201ENST00000440592 271 ntBASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 AC092647.2-201ENST00000452998 253 ntBASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 AC010350.1-201ENST00000504908 231 ntBASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 MIR4480-201ENST00000582492 71 ntBASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.99□□□□□ -1.45
UPF3BQ9BZI7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AL022393.1-201ENST00000625142 1677 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 AC012618.3-205ENST00000637896 1496 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 RN7SKP113-201ENST00000363891 295 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 SNORA70.10-201ENST00000384515 134 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 LRRC37BP1-201ENST00000398851 714 ntBASIC5.98□□□□□ -1.45
UPF3BQ9BZI7 CTSL3P-202ENST00000412179 788 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms