Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 RN7SKP149-201ENST00000363008 344 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 Y_RNA.408-201ENST00000383987 102 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 Y_RNA.436-201ENST00000384097 102 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 BX679664.2-201ENST00000439282 283 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AL591503.2-201ENST00000442314 1005 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 MTCO2P7-201ENST00000446518 666 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 EEF1B2P3-201ENST00000447718 678 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 RPL23AP64-201ENST00000469465 435 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC048346.1-201ENST00000510247 144 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC008562.1-201ENST00000521763 330 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 OR5AZ1P-201ENST00000527448 943 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AL590229.1-201ENST00000603497 542 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AL592221.1-201ENST00000605266 382 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC114546.4-201ENST00000624413 369 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AC068213.1-201ENST00000625124 226 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 MIR193BHG-214ENST00000641765 509 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AL034546.1-201ENST00000623740 3693 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AL391994.1-201ENST00000254724 282 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 RNU6-931P-201ENST00000363850 107 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 RNU6-304P-201ENST00000364855 107 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 RNA5SP85-201ENST00000365378 119 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 RNU6-1200P-201ENST00000384162 107 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 SNORA51.12-201ENST00000384448 134 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 FDPSP5-201ENST00000399474 1057 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC019178.2-201ENST00000423595 505 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 RPL23AP28-201ENST00000448062 470 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 MTND4LP3-201ENST00000468320 276 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC109471.1-201ENST00000511631 612 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC010285.3-201ENST00000511668 676 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 TCP11X3P-202ENST00000514289 1254 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms