Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 PDZK1P1-202ENST00000425209 1350 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 SEC63P2-201ENST00000503863 1939 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 SNORD116-12-201ENST00000384468 92 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 MIR137-201ENST00000385223 102 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 MCTS2P-201ENST00000394552 546 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 MTCO2P31-201ENST00000402702 684 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 RNU2-22P-201ENST00000411266 212 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 RN7SKP279-201ENST00000411383 298 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 RPL22P18-201ENST00000417197 377 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AL354766.1-201ENST00000423396 542 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC107015.1-201ENST00000466902 747 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC119751.1-201ENST00000513357 765 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 UBTFL10-201ENST00000528532 562 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 PCNAP4-201ENST00000532690 730 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 OR4U1P-201ENST00000554958 912 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC027104.1-201ENST00000563702 681 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 GAS5-AS1-201ENST00000602767 694 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC005618.4-201ENST00000625053 554 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 FRG1EP-201ENST00000634469 770 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AF287957.1-201ENST00000607368 1595 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 AC097063.1-201ENST00000426714 1797 ntBASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM54Q9BYV2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 MIR513B-201ENST00000385136 84 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 SNORA11.5-201ENST00000408163 128 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 RNU4-22P-201ENST00000411058 166 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC013404.1-201ENST00000413068 249 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 BTF3P8-201ENST00000414577 526 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 RNGTTP1-201ENST00000420965 728 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC126120.1-201ENST00000431082 470 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 VN1R110P-201ENST00000438988 971 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AL050341.1-201ENST00000447743 313 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC244505.3-201ENST00000454598 187 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC091544.1-201ENST00000484702 348 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 MTCYBP35-201ENST00000503630 1137 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC111193.1-201ENST00000504097 155 ntBASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM54Q9BYV2 AC005351.1-201ENST00000511152 786 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms