Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC011742.2-201ENST00000443818 352 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 TAF9P1-201ENST00000445421 515 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 MTCO1P48-201ENST00000448024 1096 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 VNN3-210ENST00000450865 596 ntTSL 4 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 RPL26P28-201ENST00000451325 435 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 USP9YP10-201ENST00000454868 628 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 TAF9P2-201ENST00000454958 515 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC116337.2-201ENST00000477662 156 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 RPS14P8-201ENST00000478778 369 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 RN7SL187P-201ENST00000495587 303 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC021220.1-201ENST00000507445 630 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 USP9YP5-201ENST00000511770 630 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC026412.2-201ENST00000512270 1075 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 RNU6-583P-201ENST00000516012 92 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 RNA5SP216-201ENST00000516111 123 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 OR7K1P-201ENST00000546439 926 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC090515.3-201ENST00000560431 315 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 ROCK1P1-201ENST00000573767 549 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 MIR4732-201ENST00000581873 76 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC012175.1-201ENST00000603755 531 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC010200.2-201ENST00000605098 235 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 MIR7844-201ENST00000616161 122 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 MIR7854-201ENST00000620068 65 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC090582.1-201ENST00000636321 199 ntBASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
TRAIPQ9BWF2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 SAGE3P-201ENST00000619800 1635 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CYP1D1P-201ENST00000416662 1433 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 RPL11P4-201ENST00000332269 436 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AL672167.1-206ENST00000356293 943 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 VDAC2P1-201ENST00000399358 958 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 MTCYBP38-201ENST00000417160 1123 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 THEM7P-201ENST00000419556 672 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC007383.1-201ENST00000445875 636 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 UBBP5-201ENST00000446970 266 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 KATNBL1P6-201ENST00000453433 915 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 ZNF114P1-201ENST00000453500 292 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 RPL29P23-201ENST00000486188 442 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC096754.1-201ENST00000508904 818 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AP000873.5-201ENST00000533906 236 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 FXNP1-201ENST00000555153 337 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 MT1CP-201ENST00000567054 174 ntBASIC7.38□□□□□ -1.23
TRAIPQ9BWF2 ANP32BP1-202ENST00000568553 737 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms