Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC107027.3-201ENST00000565095 3473 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 BX005019.1-201ENST00000561881 1810 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 U3.3-201ENST00000362986 216 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 RNA5SP90-201ENST00000364801 99 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 RPL21P67-201ENST00000402896 478 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AL589765.3-201ENST00000446084 462 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 CLIC4P1-201ENST00000453177 535 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 RN7SL184P-201ENST00000488308 297 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC108157.1-201ENST00000510511 539 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AL671862.1-201ENST00000515851 349 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 RNU6-941P-201ENST00000516346 108 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC005229.3-201ENST00000603438 323 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC096553.1-201ENST00000605169 829 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AP001962.1-201ENST00000624114 559 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AC119674.1-212ENST00000641155 993 ntBASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM5Q96HC4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 THAP12P5-201ENST00000405864 2275 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 GVINP1-202ENST00000531871 7271 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 ZNF733P-202ENST00000444809 1573 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC083799.1-201ENST00000366451 910 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 RNU6-178P-201ENST00000384631 104 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 MIR105-1-201ENST00000385222 81 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 RPS4XP16-201ENST00000427198 791 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 RPS26P41-201ENST00000450370 284 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC015864.1-201ENST00000496512 544 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 MYL12BP2-201ENST00000503948 512 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC012400.1-201ENST00000518452 381 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 SNORD95-201ENST00000579879 68 ntBASIC5.13□□□□□ -1.59
PDLIM5Q96HC4 AC127024.5-201ENST00000580085 462 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms