Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 RNA5SP440-201ENST00000612665 119 ntBASIC5.32□□□□□ -1.56
VMP1Q96GC9 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 AC021766.1-201ENST00000624404 741 ntBASIC5.32□□□□□ -1.56
VMP1Q96GC9 MIR4302-201ENST00000638058 60 ntBASIC5.32□□□□□ -1.56
VMP1Q96GC9 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VMP1Q96GC9 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
VMP1Q96GC9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.32□□□□□ -1.56
VMP1Q96GC9 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
VMP1Q96GC9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC114546.3-201ENST00000623582 1734 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VMP1Q96GC9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VMP1Q96GC9 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VMP1Q96GC9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VMP1Q96GC9 PWAR1-201ENST00000624188 2414 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 OR52B1P-201ENST00000316506 909 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VMP1Q96GC9 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 RN7SKP293-201ENST00000411389 296 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 BMS1P17-202ENST00000416720 316 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC073464.3-201ENST00000422564 712 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL662874.1-201ENST00000426065 230 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL590623.1-201ENST00000427864 105 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 RPS26P4-201ENST00000431743 355 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 GAPDHP48-201ENST00000436626 961 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL391987.1-201ENST00000441025 200 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC005297.1-201ENST00000444765 862 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 GEMIN8P3-201ENST00000445417 720 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 RPS27AP2-201ENST00000457576 465 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 COX6B1P2-201ENST00000489624 230 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 MRPS16P1-201ENST00000523462 412 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 SMARCE1P4-201ENST00000523647 241 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 OR8A2P-201ENST00000528631 952 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC106730.2-201ENST00000566641 540 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC011445.2-201ENST00000599274 173 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC063977.5-201ENST00000601044 974 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AL353729.2-201ENST00000605859 1249 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VMP1Q96GC9 AC120338.1-201ENST00000625074 1541 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VMP1Q96GC9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VMP1Q96GC9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 CCT8P1-201ENST00000413611 1657 ntBASIC5.31□□□□□ -1.56
VMP1Q96GC9 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
VMP1Q96GC9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
VMP1Q96GC9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
VMP1Q96GC9 AC096656.1-201ENST00000623826 1364 ntBASIC5.3□□□□□ -1.56
VMP1Q96GC9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
VMP1Q96GC9 AL034370.1-201ENST00000397254 1590 ntBASIC5.3□□□□□ -1.56
VMP1Q96GC9 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VMP1Q96GC9 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VMP1Q96GC9 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms