Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC112206.3-201ENST00000514578 389 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 HIGD1AP6-201ENST00000521833 279 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.68□□□□□ -1.18
HLA-CQ95604 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-CQ95604 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-CQ95604 AC092718.4-201ENST00000566639 716 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 MIR5186-201ENST00000577504 120 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC006270.2-201ENST00000578523 652 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 MIR4732-201ENST00000581873 76 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 MIR4470-201ENST00000583453 72 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 RPSAP66-201ENST00000592196 606 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 RPL7AP69-201ENST00000595306 806 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 RPS4XP21-201ENST00000603814 750 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AL627309.6-201ENST00000606857 840 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC015982.1-201ENST00000608113 465 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC7.68□□□□□ -1.18
HLA-CQ95604 uc_338.29-201ENST00000615099 168 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-CQ95604 AC008626.2-201ENST00000624425 248 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
HLA-CQ95604 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 GSTM4-203ENST00000369833 3990 ntTSL 5 BASIC7.68□□□□□ -1.18
HLA-CQ95604 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 TNIK-210ENST00000470834 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 ERCC6-202ENST00000374127 1782 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 XRCC6P2-201ENST00000457831 1822 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HLA-CQ95604 MTND4P35-201ENST00000604257 1375 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 INO80C-212ENST00000592173 3245 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-CQ95604 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-CQ95604 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC7.68□□□□□ -1.18
HLA-CQ95604 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
HLA-CQ95604 AURKA-204ENST00000395907 1902 ntTSL 3 BASIC7.68□□□□□ -1.18
HLA-CQ95604 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 AC217777.1-201ENST00000570034 1471 ntBASIC7.68□□□□□ -1.18
HLA-CQ95604 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
HLA-CQ95604 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC7.67□□□□□ -1.18
HLA-CQ95604 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
HLA-CQ95604 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
HLA-CQ95604 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC7.67□□□□□ -1.18
HLA-CQ95604 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 SNORA64.3-201ENST00000365647 134 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 TACC2-207ENST00000369000 3813 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 MT-TR-201ENST00000387439 65 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 RN7SKP86-201ENST00000410454 332 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 NPM1P40-201ENST00000412758 733 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 RPL35AP24-201ENST00000413846 330 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 RBMY2KP-201ENST00000418221 992 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 RPS7P5-201ENST00000441482 581 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC7.67□□□□□ -1.18
HLA-CQ95604 HIGD1AP16-201ENST00000450986 258 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 RN7SL492P-201ENST00000460700 295 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.67□□□□□ -1.18
HLA-CQ95604 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC7.67□□□□□ -1.18
HLA-CQ95604 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC7.67□□□□□ -1.18
HLA-CQ95604 RNA5SP401-201ENST00000515920 127 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 RNU6-201P-201ENST00000517100 61 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.67□□□□□ -1.18
HLA-CQ95604 GTF2IP11-201ENST00000526931 420 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 ANP32BP1-202ENST00000568553 737 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 AC099489.2-201ENST00000574976 260 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.67□□□□□ -1.18
HLA-CQ95604 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 AC011497.2-201ENST00000600255 639 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 AL022345.1-201ENST00000607292 135 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 AC090425.1-201ENST00000610007 140 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.67□□□□□ -1.18
HLA-CQ95604 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.67□□□□□ -1.18
HLA-CQ95604 CASC19-232ENST00000641480 1244 ntBASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms