Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 RNA5SP46-201ENST00000362370 120 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 RPL10P10-201ENST00000403509 664 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AL133388.1-201ENST00000404509 287 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 RNA5SP178-201ENST00000410380 128 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 RPL34P3-201ENST00000421454 338 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 MTND4P24-201ENST00000424002 397 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 SUMO2P1-206ENST00000445436 284 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 HMGN1P36-201ENST00000446623 298 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 EIF2S2P4-201ENST00000461070 984 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC138866.2-201ENST00000508650 584 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC011411.1-201ENST00000509592 876 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC106872.4-201ENST00000510050 523 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AP005262.1-201ENST00000582646 997 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 KATNBL1P5-201ENST00000605015 517 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC067838.1-201ENST00000606064 577 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 RN7SL787P-201ENST00000613000 284 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 CU639417.4-201ENST00000623928 207 ntBASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SLC44A1Q8WWI5 AC110792.3-201ENST00000595906 1614 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 RNU1-146P-201ENST00000364015 165 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 RNA5SP242-201ENST00000364171 118 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 SNORD115-48-201ENST00000364764 76 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 RNU6-1176P-201ENST00000390955 107 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 OR4K12P-201ENST00000406538 961 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 RNA5SP487-201ENST00000410186 122 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 Z93019.1-201ENST00000416450 973 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 GTF3AP1-201ENST00000416942 1004 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 SEC63P1-201ENST00000425785 1258 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 NANOGP4-201ENST00000427230 913 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC009238.2-201ENST00000431026 355 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AL606490.7-201ENST00000433136 191 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 SUMO2P3-201ENST00000438311 288 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC064862.4-201ENST00000442180 334 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 GTF3AP5-201ENST00000442645 697 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 RPL7AP61-201ENST00000443410 636 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 BTF3P6-201ENST00000448054 499 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC104634.1-201ENST00000452720 462 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 RPS4XP12-201ENST00000461747 709 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 FABP5P6-201ENST00000510588 409 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 HMGB1P47-201ENST00000511281 589 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 RN7SKP99-201ENST00000517028 307 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AL121839.1-201ENST00000556233 1185 ntBASIC5.26□□□□□ -1.57
SLC44A1Q8WWI5 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms