Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 MIR4443-201ENST00000585052 53 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL353778.1-201ENST00000603149 408 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC018618.2-201ENST00000604770 446 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC018638.7-201ENST00000605836 1114 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AP002802.2-201ENST00000605877 235 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AP004607.9-201ENST00000618202 316 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC010435.1-201ENST00000623353 1177 ntBASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SIMC1Q8NDZ2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC022164.1-201ENST00000568767 2673 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 RNU6-185P-201ENST00000384421 107 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL132875.1-201ENST00000403623 949 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 HMGB3P19-201ENST00000403971 560 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AP000357.1-201ENST00000409926 1165 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 RNA5SP156-201ENST00000410250 110 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 RN7SKP222-201ENST00000410651 315 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 VN1R42P-201ENST00000424651 344 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL353662.1-201ENST00000439099 327 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 MED6P1-201ENST00000439659 713 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 HMGB1P7-201ENST00000450921 612 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC002553.3-201ENST00000453002 341 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC008379.1-201ENST00000463655 464 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC093719.1-201ENST00000480427 441 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 SNORA31.13-201ENST00000516624 135 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 IGKV3D-25-201ENST00000519599 235 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC008083.2-201ENST00000546707 476 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC007346.1-201ENST00000569208 867 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC124283.4-201ENST00000581815 456 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC068768.2-201ENST00000602352 343 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 HULC.1-201ENST00000612720 240 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL035461.2-201ENST00000619201 524 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AC007342.8-201ENST00000623278 678 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 AL731532.1-201ENST00000623972 4236 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 MAPK10-338ENST00000641647 3362 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 PARP4P2-201ENST00000446672 3326 ntBASIC5.68□□□□□ -1.5
SIMC1Q8NDZ2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms