Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 MTATP6P20-201ENST00000414147 562 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AL390879.1-201ENST00000439143 386 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 ARF4P4-201ENST00000439608 520 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 H3F3BP1-201ENST00000440551 403 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC234781.3-201ENST00000452540 973 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AL157777.1-201ENST00000468100 304 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC103987.1-201ENST00000473394 348 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 METTL15P1-201ENST00000481421 1045 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 BOLA3P3-201ENST00000505182 232 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 RFPL4AP3-201ENST00000515267 345 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC139365.2-201ENST00000517972 253 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 OR4A6P-201ENST00000534364 970 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC092490.3-201ENST00000545370 572 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 MTND3P12-201ENST00000559068 328 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC009962.1-201ENST00000567327 3813 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 SNX6P1-201ENST00000601728 1224 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC091193.1-201ENST00000604640 448 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC245100.7-201ENST00000609678 442 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC024255.1-201ENST00000614376 102 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 CASC19-221ENST00000641309 1382 ntBASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.79□□□□□ -1.32
SMC1BQ8NDV3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 SNORA70.2-201ENST00000364506 135 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 RNA5SP87-201ENST00000384155 118 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 RNU6-31P-201ENST00000384388 108 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 TAS2R15P-201ENST00000390674 928 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 RNA5SP251-201ENST00000410614 137 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 CYP4F30P-202ENST00000420048 405 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 MTND2P5-201ENST00000432656 1006 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 MTATP6P26-201ENST00000445926 662 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 MTND1P31-201ENST00000449206 961 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC092824.1-201ENST00000483524 576 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC020699.1-201ENST00000505161 445 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC139103.1-201ENST00000534696 1030 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 BLZF2P-201ENST00000553776 1130 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 MTCYBP23-201ENST00000558717 1102 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC011497.2-201ENST00000600255 639 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC234772.3-201ENST00000602277 528 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC022022.2-201ENST00000602989 360 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AL157392.4-201ENST00000609756 345 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AL118522.2-201ENST00000616045 615 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 AC132825.7-201ENST00000638744 335 ntBASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
SMC1BQ8NDV3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms