Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AP005901.4-201ENST00000577336 569 ntBASIC6.09□□□□□ -1.43
CTR9Q6PD62 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.09□□□□□ -1.43
CTR9Q6PD62 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC6.09□□□□□ -1.43
CTR9Q6PD62 MIR6730-201ENST00000622213 67 ntBASIC6.09□□□□□ -1.43
CTR9Q6PD62 FRG1EP-201ENST00000634469 770 ntBASIC6.09□□□□□ -1.43
CTR9Q6PD62 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.09□□□□□ -1.43
CTR9Q6PD62 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CTR9Q6PD62 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
CTR9Q6PD62 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.09□□□□□ -1.43
CTR9Q6PD62 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
CTR9Q6PD62 MTCO1P15-201ENST00000529569 1526 ntBASIC6.09□□□□□ -1.44
CTR9Q6PD62 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
CTR9Q6PD62 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
CTR9Q6PD62 AC131971.1-201ENST00000332881 1482 ntBASIC6.09□□□□□ -1.44
CTR9Q6PD62 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTR9Q6PD62 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTR9Q6PD62 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTR9Q6PD62 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTR9Q6PD62 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AL078599.1-201ENST00000402075 293 ntBASIC6.08□□□□□ -1.44
CTR9Q6PD62 AL645733.1-201ENST00000402250 217 ntBASIC6.08□□□□□ -1.44
CTR9Q6PD62 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 VN1R54P-201ENST00000435210 1049 ntBASIC6.08□□□□□ -1.44
CTR9Q6PD62 VN1R96P-201ENST00000446052 858 ntBASIC6.08□□□□□ -1.44
CTR9Q6PD62 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AC021733.2-201ENST00000518830 497 ntBASIC6.08□□□□□ -1.44
CTR9Q6PD62 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AC027369.5-201ENST00000533838 755 ntBASIC6.08□□□□□ -1.44
CTR9Q6PD62 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 BNIP3P35-201ENST00000604530 490 ntBASIC6.08□□□□□ -1.44
CTR9Q6PD62 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTR9Q6PD62 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CTR9Q6PD62 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTR9Q6PD62 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CTR9Q6PD62 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.08□□□□□ -1.44
CTR9Q6PD62 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTR9Q6PD62 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC009238.2-201ENST00000431026 355 ntBASIC6.07□□□□□ -1.44
CTR9Q6PD62 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 PA2G4P6-201ENST00000438325 1197 ntBASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 BX842559.2-201ENST00000451418 605 ntBASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTR9Q6PD62 NDUFB5P1-201ENST00000508134 564 ntBASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CTR9Q6PD62 BNIP3P32-201ENST00000600015 554 ntBASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC105254.2-201ENST00000603636 436 ntBASIC6.07□□□□□ -1.44
CTR9Q6PD62 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.07□□□□□ -1.44
CTR9Q6PD62 CASC19-221ENST00000641309 1382 ntBASIC6.06□□□□□ -1.44
CTR9Q6PD62 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CTR9Q6PD62 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTR9Q6PD62 AC112255.1-201ENST00000624070 2493 ntBASIC6.06□□□□□ -1.44
CTR9Q6PD62 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTR9Q6PD62 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.06□□□□□ -1.44
CTR9Q6PD62 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.06□□□□□ -1.44
CTR9Q6PD62 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.06□□□□□ -1.44
CTR9Q6PD62 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTR9Q6PD62 RNA5SP223-201ENST00000365174 120 ntBASIC6.06□□□□□ -1.44
CTR9Q6PD62 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.06□□□□□ -1.44
CTR9Q6PD62 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTR9Q6PD62 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CTR9Q6PD62 SNORA81-201ENST00000408493 178 ntBASIC6.06□□□□□ -1.44
CTR9Q6PD62 AC016769.2-201ENST00000414815 475 ntBASIC6.06□□□□□ -1.44
CTR9Q6PD62 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.06□□□□□ -1.44
CTR9Q6PD62 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
CTR9Q6PD62 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.06□□□□□ -1.44
CTR9Q6PD62 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms