Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 FAM92A1P2-202ENST00000504766 877 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 OR7E99P-201ENST00000505750 922 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AC079395.1-201ENST00000510981 262 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.84□□□□□ -1.31
SOX4Q06945 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.84□□□□□ -1.31
SOX4Q06945 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SOX4Q06945 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.84□□□□□ -1.31
SOX4Q06945 AC015871.2-201ENST00000603605 948 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AC139493.1-201ENST00000604368 397 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AL008723.3-201ENST00000608926 449 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 RN7SL261P-201ENST00000613441 282 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AL136981.2-201ENST00000617319 734 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AC006338.1-201ENST00000618453 749 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 SNORA11.6-201ENST00000619030 128 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 DUXAP9-208ENST00000622815 614 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.84□□□□□ -1.31
SOX4Q06945 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.84□□□□□ -1.31
SOX4Q06945 AL353743.4-201ENST00000422653 1547 ntBASIC6.84□□□□□ -1.31
SOX4Q06945 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX4Q06945 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX4Q06945 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SOX4Q06945 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SOX4Q06945 LPAL2-203ENST00000454031 2498 ntBASIC6.84□□□□□ -1.32
SOX4Q06945 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
SOX4Q06945 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
SOX4Q06945 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC6.84□□□□□ -1.32
SOX4Q06945 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SOX4Q06945 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
SOX4Q06945 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 AL359976.1-201ENST00000418655 3528 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX4Q06945 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SOX4Q06945 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SOX4Q06945 OR1L1-202ENST00000373686 1083 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX4Q06945 RNU6-116P-201ENST00000384042 109 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 RPL17P50-201ENST00000396131 546 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.83□□□□□ -1.32
SOX4Q06945 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.83□□□□□ -1.32
SOX4Q06945 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.83□□□□□ -1.32
SOX4Q06945 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX4Q06945 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 DNAJC19P4-201ENST00000440115 345 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 AC010240.2-201ENST00000445363 1205 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 PAXBP1P1-201ENST00000449315 447 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 HMGB1P7-201ENST00000450921 612 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 DNAJC19P1-201ENST00000455312 319 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 RN7SL254P-201ENST00000460609 284 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 RN7SL714P-201ENST00000487050 298 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX4Q06945 AC091965.3-201ENST00000506236 208 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX4Q06945 AC109445.1-201ENST00000512356 383 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.83□□□□□ -1.32
SOX4Q06945 RNU6-314P-201ENST00000516574 104 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX4Q06945 AC084337.1-201ENST00000524809 686 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 AL121839.1-201ENST00000556233 1185 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX4Q06945 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.83□□□□□ -1.32
SOX4Q06945 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.83□□□□□ -1.32
SOX4Q06945 AC010133.1-201ENST00000615809 842 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 MIR7844-201ENST00000616161 122 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 AC130448.2-201ENST00000624082 374 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 MIR1910-201ENST00000636955 80 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
SOX4Q06945 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.83□□□□□ -1.32
SOX4Q06945 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 AC004014.2-201ENST00000623718 5122 ntBASIC6.83□□□□□ -1.32
SOX4Q06945 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SOX4Q06945 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
SOX4Q06945 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX4Q06945 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX4Q06945 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms