Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.43□□□□□ -1.7
UBA52P62987 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 AC112255.1-201ENST00000624070 2493 ntBASIC4.43□□□□□ -1.7
UBA52P62987 RNA5SP305-201ENST00000362665 119 ntBASIC4.43□□□□□ -1.7
UBA52P62987 RN7SKP103-201ENST00000363848 320 ntBASIC4.43□□□□□ -1.7
UBA52P62987 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.43□□□□□ -1.7
UBA52P62987 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
UBA52P62987 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.43□□□□□ -1.7
UBA52P62987 RBMY2KP-201ENST00000418221 992 ntBASIC4.43□□□□□ -1.7
UBA52P62987 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.43□□□□□ -1.7
UBA52P62987 H2AFZP6-201ENST00000444403 394 ntBASIC4.43□□□□□ -1.7
UBA52P62987 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.43□□□□□ -1.7
UBA52P62987 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 AC073587.1-201ENST00000447093 876 ntBASIC4.43□□□□□ -1.7
UBA52P62987 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.43□□□□□ -1.7
UBA52P62987 SEPT7P3-201ENST00000455017 621 ntBASIC4.43□□□□□ -1.7
UBA52P62987 AL445433.1-201ENST00000457507 257 ntBASIC4.43□□□□□ -1.7
UBA52P62987 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.43□□□□□ -1.7
UBA52P62987 AC022133.1-201ENST00000490961 571 ntBASIC4.43□□□□□ -1.7
UBA52P62987 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.43□□□□□ -1.7
UBA52P62987 AC022360.1-201ENST00000521058 340 ntBASIC4.43□□□□□ -1.7
UBA52P62987 AC022882.1-201ENST00000532142 501 ntBASIC4.43□□□□□ -1.7
UBA52P62987 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.43□□□□□ -1.7
UBA52P62987 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.43□□□□□ -1.7
UBA52P62987 MIR4436B2-201ENST00000581415 91 ntBASIC4.43□□□□□ -1.7
UBA52P62987 MIR4436B1-201ENST00000583272 91 ntBASIC4.43□□□□□ -1.7
UBA52P62987 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.43□□□□□ -1.7
UBA52P62987 AC233280.2-201ENST00000603917 1070 ntBASIC4.43□□□□□ -1.7
UBA52P62987 MIR6820-201ENST00000611508 62 ntBASIC4.43□□□□□ -1.7
UBA52P62987 AP001784.1-201ENST00000624107 428 ntBASIC4.43□□□□□ -1.7
UBA52P62987 AC099654.6-201ENST00000636487 512 ntBASIC4.43□□□□□ -1.7
UBA52P62987 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
UBA52P62987 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
UBA52P62987 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBA52P62987 AC011493.1-201ENST00000596753 1632 ntBASIC4.43□□□□□ -1.7
UBA52P62987 HSPA8P18-201ENST00000439846 1928 ntBASIC4.42□□□□□ -1.7
UBA52P62987 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
UBA52P62987 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
UBA52P62987 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBA52P62987 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBA52P62987 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.42□□□□□ -1.7
UBA52P62987 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
UBA52P62987 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
UBA52P62987 AC116158.1-201ENST00000560231 2129 ntBASIC4.42□□□□□ -1.7
UBA52P62987 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBA52P62987 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBA52P62987 U3.2-201ENST00000362981 210 ntBASIC4.42□□□□□ -1.7
UBA52P62987 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.42□□□□□ -1.7
UBA52P62987 RNU1-106P-201ENST00000384382 164 ntBASIC4.42□□□□□ -1.7
UBA52P62987 AC136624.1-201ENST00000400791 413 ntBASIC4.42□□□□□ -1.7
UBA52P62987 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.42□□□□□ -1.7
UBA52P62987 AC002524.1-201ENST00000411687 547 ntBASIC4.42□□□□□ -1.7
UBA52P62987 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.42□□□□□ -1.7
UBA52P62987 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
UBA52P62987 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.42□□□□□ -1.7
UBA52P62987 DSTNP5-201ENST00000427921 523 ntBASIC4.42□□□□□ -1.7
UBA52P62987 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.42□□□□□ -1.7
UBA52P62987 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.42□□□□□ -1.7
UBA52P62987 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.42□□□□□ -1.7
UBA52P62987 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.42□□□□□ -1.7
UBA52P62987 AC073850.1-201ENST00000449243 255 ntBASIC4.42□□□□□ -1.7
UBA52P62987 AL389915.2-201ENST00000454576 441 ntBASIC4.42□□□□□ -1.7
UBA52P62987 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.42□□□□□ -1.7
UBA52P62987 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.42□□□□□ -1.7
UBA52P62987 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.42□□□□□ -1.7
UBA52P62987 AC109462.1-201ENST00000491087 368 ntBASIC4.42□□□□□ -1.7
UBA52P62987 HMGB1P40-201ENST00000525121 540 ntBASIC4.42□□□□□ -1.7
UBA52P62987 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.42□□□□□ -1.7
UBA52P62987 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.42□□□□□ -1.7
UBA52P62987 AC133644.2-201ENST00000608142 540 ntBASIC4.42□□□□□ -1.7
UBA52P62987 OR7M1P-201ENST00000608946 533 ntBASIC4.42□□□□□ -1.7
UBA52P62987 AC244107.2-201ENST00000611773 76 ntBASIC4.42□□□□□ -1.7
UBA52P62987 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.42□□□□□ -1.7
UBA52P62987 TMEM30CP-203ENST00000637814 1035 ntBASIC4.42□□□□□ -1.7
UBA52P62987 AC073869.8-201ENST00000641806 335 ntBASIC4.42□□□□□ -1.7
UBA52P62987 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.42□□□□□ -1.7
UBA52P62987 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBA52P62987 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
UBA52P62987 MIPEPP2-201ENST00000422560 1819 ntBASIC4.42□□□□□ -1.7
UBA52P62987 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
UBA52P62987 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.41□□□□□ -1.7
UBA52P62987 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 BTBD10P1-201ENST00000549824 1352 ntBASIC4.41□□□□□ -1.7
UBA52P62987 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
UBA52P62987 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
UBA52P62987 Z95327.2-201ENST00000414579 1873 ntBASIC4.41□□□□□ -1.7
UBA52P62987 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.41□□□□□ -1.7
UBA52P62987 MT-RNR2-201ENST00000387347 1559 ntBASIC4.41□□□□□ -1.7
UBA52P62987 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.41□□□□□ -1.7
UBA52P62987 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 MIR133B-201ENST00000362210 119 ntBASIC4.41□□□□□ -1.7
UBA52P62987 RN7SKP153-201ENST00000365026 316 ntBASIC4.41□□□□□ -1.7
UBA52P62987 RNU1-43P-201ENST00000365052 165 ntBASIC4.41□□□□□ -1.7
UBA52P62987 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
UBA52P62987 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms