Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.94□□□□□ -1.46
GFRA1P56159 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
GFRA1P56159 AC119744.1-201ENST00000454746 1715 ntBASIC5.94□□□□□ -1.46
GFRA1P56159 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
GFRA1P56159 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 RNU5F-7P-201ENST00000363696 115 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
GFRA1P56159 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
GFRA1P56159 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 RNU2-22P-201ENST00000411266 212 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 MTND1P23-201ENST00000416931 372 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 RPL7AP51-201ENST00000422016 760 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC069154.1-201ENST00000432914 542 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 ARMC4P1-201ENST00000438905 707 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AL512286.1-201ENST00000439244 400 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 AL592447.1-201ENST00000447592 540 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 RPS27AP15-201ENST00000447672 466 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 RPL19P11-201ENST00000495944 589 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC106822.1-201ENST00000502647 526 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC011352.3-201ENST00000505162 593 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.93□□□□□ -1.46
GFRA1P56159 HMGB1P44-201ENST00000508597 572 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 IGKV2-36-201ENST00000519999 223 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC004217.3-201ENST00000551552 878 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 PCMTD1P2-201ENST00000565017 355 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 MRPS21P9-201ENST00000571150 257 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 VN1R84P-201ENST00000593697 235 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC020914.6-201ENST00000594327 272 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC004805.3-201ENST00000603178 310 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AL137072.1-201ENST00000603444 466 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 AL589743.6-201ENST00000611025 117 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC026368.1-201ENST00000614934 690 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 U1.41-201ENST00000617626 165 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC089999.3-201ENST00000622440 577 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 AC114546.4-201ENST00000624413 369 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 SNX18P10-201ENST00000625014 519 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.93□□□□□ -1.46
GFRA1P56159 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 AL161912.4-201ENST00000623889 2468 ntBASIC5.93□□□□□ -1.46
GFRA1P56159 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
GFRA1P56159 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.93□□□□□ -1.46
GFRA1P56159 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
GFRA1P56159 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms