Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC090018.1-201ENST00000434369 367 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AC046176.1-201ENST00000435260 1170 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH11P55287 AL138787.1-202ENST00000437804 898 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH11P55287 AC007000.2-201ENST00000442564 487 ntBASIC4.92□□□□□ -1.62
CDH11P55287 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH11P55287 BUD31P2-201ENST00000449374 300 ntBASIC4.92□□□□□ -1.62
CDH11P55287 PRPF38AP1-201ENST00000451976 933 ntBASIC4.92□□□□□ -1.62
CDH11P55287 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH11P55287 AL133445.1-201ENST00000467051 452 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AC108729.2-201ENST00000476543 840 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AC093663.2-201ENST00000484625 313 ntBASIC4.92□□□□□ -1.62
CDH11P55287 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH11P55287 AC093763.2-201ENST00000505334 1223 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH11P55287 AC093770.1-201ENST00000511559 571 ntBASIC4.92□□□□□ -1.62
CDH11P55287 BX510359.5-201ENST00000515651 304 ntBASIC4.92□□□□□ -1.62
CDH11P55287 RNU6-1102P-201ENST00000516149 96 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AC103833.1-201ENST00000517442 172 ntBASIC4.92□□□□□ -1.62
CDH11P55287 IGLV2-28-201ENST00000520681 304 ntBASIC4.92□□□□□ -1.62
CDH11P55287 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH11P55287 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH11P55287 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.92□□□□□ -1.62
CDH11P55287 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH11P55287 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH11P55287 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.92□□□□□ -1.62
CDH11P55287 AC025574.2-201ENST00000615621 514 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AL163051.2-201ENST00000618976 735 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AC015722.2-201ENST00000622210 551 ntBASIC4.92□□□□□ -1.62
CDH11P55287 AC097460.3-201ENST00000623099 442 ntBASIC4.92□□□□□ -1.62
CDH11P55287 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH11P55287 AC073869.8-201ENST00000641806 335 ntBASIC4.92□□□□□ -1.62
CDH11P55287 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH11P55287 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CDH11P55287 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH11P55287 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH11P55287 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH11P55287 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH11P55287 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH11P55287 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 TRIM51GP-201ENST00000534741 1350 ntBASIC4.91□□□□□ -1.62
CDH11P55287 CASC19-248ENST00000641674 1356 ntBASIC4.91□□□□□ -1.62
CDH11P55287 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 AL353796.1-201ENST00000561542 3241 ntBASIC4.91□□□□□ -1.62
CDH11P55287 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 RPL21P67-201ENST00000402896 478 ntBASIC4.91□□□□□ -1.62
CDH11P55287 Z86062.1-201ENST00000406773 777 ntBASIC4.91□□□□□ -1.62
CDH11P55287 RANP4-201ENST00000413361 655 ntBASIC4.91□□□□□ -1.62
CDH11P55287 NPM1P4-201ENST00000414095 812 ntBASIC4.91□□□□□ -1.62
CDH11P55287 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH11P55287 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH11P55287 HSPE1P16-201ENST00000426640 348 ntBASIC4.91□□□□□ -1.62
CDH11P55287 DSTNP5-201ENST00000427921 523 ntBASIC4.91□□□□□ -1.62
CDH11P55287 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 AC245517.2-201ENST00000442890 346 ntBASIC4.91□□□□□ -1.62
CDH11P55287 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH11P55287 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH11P55287 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH11P55287 RPL23AP73-201ENST00000492507 471 ntBASIC4.91□□□□□ -1.62
CDH11P55287 AC108693.1-201ENST00000496068 432 ntBASIC4.91□□□□□ -1.62
CDH11P55287 AC015864.1-201ENST00000496512 544 ntBASIC4.91□□□□□ -1.62
CDH11P55287 MYL12BP2-201ENST00000503948 512 ntBASIC4.91□□□□□ -1.62
CDH11P55287 SUMO2P4-201ENST00000504193 276 ntBASIC4.91□□□□□ -1.62
CDH11P55287 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH11P55287 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH11P55287 EIF3KP3-201ENST00000514461 639 ntBASIC4.91□□□□□ -1.62
CDH11P55287 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH11P55287 IGKV2-18-201ENST00000522607 343 ntBASIC4.91□□□□□ -1.62
CDH11P55287 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH11P55287 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 AC068993.1-201ENST00000546724 589 ntBASIC4.91□□□□□ -1.62
CDH11P55287 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH11P55287 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH11P55287 MRPS21P7-201ENST00000566937 238 ntBASIC4.91□□□□□ -1.62
CDH11P55287 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CDH11P55287 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH11P55287 ZNF92P2-201ENST00000600543 1059 ntBASIC4.91□□□□□ -1.62
CDH11P55287 AL133370.2-201ENST00000619934 439 ntBASIC4.91□□□□□ -1.62
CDH11P55287 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH11P55287 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH11P55287 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH11P55287 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms