Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 RPL12P34-201ENST00000424532 479 ntBASIC6.9□□□□□ -1.3
CLTCL1P53675 CENPIP1-201ENST00000425713 902 ntBASIC6.9□□□□□ -1.3
CLTCL1P53675 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CLTCL1P53675 AL356981.1-201ENST00000454879 684 ntBASIC6.9□□□□□ -1.3
CLTCL1P53675 snoU13.1-201ENST00000459157 104 ntBASIC6.9□□□□□ -1.3
CLTCL1P53675 AC083829.1-201ENST00000503756 657 ntBASIC6.9□□□□□ -1.3
CLTCL1P53675 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
CLTCL1P53675 NPM1P5-201ENST00000557228 838 ntBASIC6.9□□□□□ -1.3
CLTCL1P53675 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.9□□□□□ -1.3
CLTCL1P53675 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC6.9□□□□□ -1.3
CLTCL1P53675 AL445423.1-201ENST00000609941 536 ntBASIC6.9□□□□□ -1.3
CLTCL1P53675 AC004232.3-201ENST00000622977 525 ntBASIC6.9□□□□□ -1.3
CLTCL1P53675 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLTCL1P53675 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLTCL1P53675 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLTCL1P53675 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.3
CLTCL1P53675 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CLTCL1P53675 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CLTCL1P53675 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.9□□□□□ -1.3
CLTCL1P53675 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.9□□□□□ -1.3
CLTCL1P53675 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLTCL1P53675 TRIM51GP-201ENST00000534741 1350 ntBASIC6.9□□□□□ -1.31
CLTCL1P53675 AL592293.2-201ENST00000422292 996 ntBASIC6.9□□□□□ -1.31
CLTCL1P53675 OR5M12P-201ENST00000423388 929 ntBASIC6.9□□□□□ -1.31
CLTCL1P53675 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.9□□□□□ -1.31
CLTCL1P53675 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.9□□□□□ -1.31
CLTCL1P53675 YWHAZP2-201ENST00000440317 728 ntBASIC6.9□□□□□ -1.31
CLTCL1P53675 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.9□□□□□ -1.31
CLTCL1P53675 RN7SL517P-201ENST00000462240 305 ntBASIC6.9□□□□□ -1.31
CLTCL1P53675 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.9□□□□□ -1.31
CLTCL1P53675 AK3P4-201ENST00000504283 583 ntBASIC6.9□□□□□ -1.31
CLTCL1P53675 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.9□□□□□ -1.31
CLTCL1P53675 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.9□□□□□ -1.31
CLTCL1P53675 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.9□□□□□ -1.31
CLTCL1P53675 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CLTCL1P53675 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.9□□□□□ -1.31
CLTCL1P53675 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.9□□□□□ -1.31
CLTCL1P53675 MIR4284-201ENST00000578924 81 ntBASIC6.9□□□□□ -1.31
CLTCL1P53675 AC011944.2-201ENST00000624440 683 ntBASIC6.9□□□□□ -1.31
CLTCL1P53675 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.9□□□□□ -1.31
CLTCL1P53675 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.31
CLTCL1P53675 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC6.9□□□□□ -1.31
CLTCL1P53675 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CLTCL1P53675 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLTCL1P53675 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLTCL1P53675 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLTCL1P53675 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLTCL1P53675 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.89□□□□□ -1.31
CLTCL1P53675 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLTCL1P53675 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
CLTCL1P53675 RPS17P8-201ENST00000434525 335 ntBASIC6.89□□□□□ -1.31
CLTCL1P53675 CBX1P1-201ENST00000440184 427 ntBASIC6.89□□□□□ -1.31
CLTCL1P53675 AC073358.1-201ENST00000505671 684 ntBASIC6.89□□□□□ -1.31
CLTCL1P53675 RN7SKP92-201ENST00000517266 244 ntBASIC6.89□□□□□ -1.31
CLTCL1P53675 AL133338.2-201ENST00000604292 736 ntBASIC6.89□□□□□ -1.31
CLTCL1P53675 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.89□□□□□ -1.31
CLTCL1P53675 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.89□□□□□ -1.31
CLTCL1P53675 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLTCL1P53675 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.89□□□□□ -1.31
CLTCL1P53675 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CLTCL1P53675 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLTCL1P53675 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLTCL1P53675 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
CLTCL1P53675 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CLTCL1P53675 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.88□□□□□ -1.31
CLTCL1P53675 RPL21P108-201ENST00000413857 481 ntBASIC6.88□□□□□ -1.31
CLTCL1P53675 COX5BP7-201ENST00000414780 274 ntBASIC6.88□□□□□ -1.31
CLTCL1P53675 AC140479.3-201ENST00000418944 1126 ntBASIC6.88□□□□□ -1.31
CLTCL1P53675 AC009506.2-201ENST00000420635 840 ntBASIC6.88□□□□□ -1.31
CLTCL1P53675 AC007064.3-201ENST00000422608 359 ntBASIC6.88□□□□□ -1.31
CLTCL1P53675 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.88□□□□□ -1.31
CLTCL1P53675 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC6.88□□□□□ -1.31
CLTCL1P53675 AC100784.1-201ENST00000522790 310 ntBASIC6.88□□□□□ -1.31
CLTCL1P53675 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CLTCL1P53675 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.88□□□□□ -1.31
CLTCL1P53675 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLTCL1P53675 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC6.88□□□□□ -1.31
CLTCL1P53675 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.88□□□□□ -1.31
CLTCL1P53675 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CLTCL1P53675 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CLTCL1P53675 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.88□□□□□ -1.31
CLTCL1P53675 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CLTCL1P53675 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CLTCL1P53675 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC6.87□□□□□ -1.31
CLTCL1P53675 RNU4-39P-201ENST00000362455 127 ntBASIC6.87□□□□□ -1.31
CLTCL1P53675 RNA5SP479-201ENST00000364858 117 ntBASIC6.87□□□□□ -1.31
CLTCL1P53675 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.87□□□□□ -1.31
CLTCL1P53675 AC234779.1-201ENST00000425910 285 ntBASIC6.87□□□□□ -1.31
CLTCL1P53675 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CLTCL1P53675 AC108751.3-201ENST00000461814 1020 ntBASIC6.87□□□□□ -1.31
CLTCL1P53675 AC025164.1-201ENST00000496249 478 ntBASIC6.87□□□□□ -1.31
CLTCL1P53675 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.87□□□□□ -1.31
CLTCL1P53675 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.87□□□□□ -1.31
CLTCL1P53675 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.87□□□□□ -1.31
CLTCL1P53675 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.87□□□□□ -1.31
CLTCL1P53675 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.87□□□□□ -1.31
CLTCL1P53675 Z95327.3-201ENST00000610385 572 ntBASIC6.87□□□□□ -1.31
CLTCL1P53675 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.87□□□□□ -1.31
CLTCL1P53675 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CLTCL1P53675 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms