Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 SAMM50P1-201ENST00000455403 1399 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCN3P51790 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCN3P51790 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLCN3P51790 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 OR6K3-202ENST00000368146 996 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 AL078599.1-201ENST00000402075 293 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCN3P51790 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 AC104837.2-201ENST00000427236 424 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.67□□□□□ -1.5
CLCN3P51790 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCN3P51790 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCN3P51790 KNOP1P3-201ENST00000446933 426 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 RPS3AP41-201ENST00000462701 778 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 RFPL4AP3-201ENST00000515267 345 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 OR4V1P-201ENST00000525394 1140 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.67□□□□□ -1.5
CLCN3P51790 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 BNIP3P35-201ENST00000604530 490 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 AL592494.3-201ENST00000609485 464 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 AC015922.4-201ENST00000612568 690 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 AC087385.3-201ENST00000620477 187 ntBASIC5.67□□□□□ -1.5
CLCN3P51790 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCN3P51790 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCN3P51790 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.67□□□□□ -1.5
CLCN3P51790 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLCN3P51790 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLCN3P51790 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
CLCN3P51790 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCN3P51790 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CLCN3P51790 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCN3P51790 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN3P51790 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCN3P51790 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLCN3P51790 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN3P51790 RN7SKP95-201ENST00000362860 303 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 RN7SKP103-201ENST00000363848 320 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN3P51790 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN3P51790 UBE2V1P15-201ENST00000407776 448 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN3P51790 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCN3P51790 AL354868.1-201ENST00000417077 482 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCN3P51790 OR2AM1P-201ENST00000422137 422 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 BX323845.1-201ENST00000432417 179 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 RPL19P16-201ENST00000433839 588 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CLCN3P51790 AL772161.1-201ENST00000439130 476 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 MED28P3-201ENST00000444288 531 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCN3P51790 AC090804.1-201ENST00000448870 490 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 RPS3AP53-201ENST00000454716 778 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 SNRPCP3-201ENST00000474888 476 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 AC083982.1-201ENST00000485679 344 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 RN7SL591P-201ENST00000496150 292 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 AC097173.1-201ENST00000505862 819 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCN3P51790 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCN3P51790 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCN3P51790 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCN3P51790 MTND4LP25-201ENST00000570218 163 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 MIR3934-201ENST00000579806 107 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 ADAD1P2-201ENST00000588476 646 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 MIMT1-201ENST00000597105 1050 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 AC105254.2-201ENST00000603636 436 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.66□□□□□ -1.5
CLCN3P51790 AL356608.1-201ENST00000610034 820 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 AC091953.3-201ENST00000623220 236 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.66□□□□□ -1.5
CLCN3P51790 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN3P51790 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN3P51790 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLCN3P51790 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.66□□□□□ -1.5
CLCN3P51790 CASC19-221ENST00000641309 1382 ntBASIC5.66□□□□□ -1.5
CLCN3P51790 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.65□□□□□ -1.5
CLCN3P51790 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.65□□□□□ -1.5
CLCN3P51790 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CLCN3P51790 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCN3P51790 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CLCN3P51790 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms