Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 CASC19-246ENST00000641625 1606 ntBASIC6.65□□□□□ -1.34
MRE11P49959 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC6.65□□□□□ -1.34
MRE11P49959 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MRE11P49959 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MRE11P49959 GAPDHP24-201ENST00000328713 983 ntBASIC6.65□□□□□ -1.34
MRE11P49959 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MRE11P49959 AL353625.1-202ENST00000366273 571 ntBASIC6.65□□□□□ -1.34
MRE11P49959 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
MRE11P49959 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
MRE11P49959 AL133270.1-201ENST00000402635 279 ntBASIC6.65□□□□□ -1.34
MRE11P49959 RMRPP5-201ENST00000411156 267 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC096533.1-201ENST00000411645 353 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.65□□□□□ -1.34
MRE11P49959 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.65□□□□□ -1.34
MRE11P49959 SDHDP6-201ENST00000414693 480 ntBASIC6.65□□□□□ -1.34
MRE11P49959 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.65□□□□□ -1.34
MRE11P49959 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.65□□□□□ -1.34
MRE11P49959 RNF19BPX-201ENST00000426224 625 ntBASIC6.65□□□□□ -1.34
MRE11P49959 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
MRE11P49959 FMO7P-201ENST00000436045 768 ntBASIC6.65□□□□□ -1.34
MRE11P49959 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.65□□□□□ -1.34
MRE11P49959 AC064862.4-201ENST00000442180 334 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.65□□□□□ -1.34
MRE11P49959 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.65□□□□□ -1.34
MRE11P49959 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.65□□□□□ -1.34
MRE11P49959 AL031313.1-201ENST00000448435 256 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC009963.2-201ENST00000453431 138 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.65□□□□□ -1.34
MRE11P49959 UBFD1P1-201ENST00000473259 814 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.65□□□□□ -1.34
MRE11P49959 GM2AP2-201ENST00000491764 562 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.65□□□□□ -1.34
MRE11P49959 RNA5SP340-201ENST00000517132 107 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.65□□□□□ -1.34
MRE11P49959 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC068993.1-201ENST00000546724 589 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.65□□□□□ -1.34
MRE11P49959 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC6.65□□□□□ -1.34
MRE11P49959 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.65□□□□□ -1.34
MRE11P49959 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.65□□□□□ -1.34
MRE11P49959 MRPS21P8-201ENST00000569196 235 ntBASIC6.65□□□□□ -1.34
MRE11P49959 MIR7853-201ENST00000584820 132 ntBASIC6.65□□□□□ -1.34
MRE11P49959 Z94722.1-201ENST00000604328 474 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC002487.1-201ENST00000604565 994 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC026741.1-201ENST00000605892 482 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC231759.1-201ENST00000616455 597 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AL512427.1-201ENST00000618593 349 ntBASIC6.65□□□□□ -1.34
MRE11P49959 FAM27E2-201ENST00000619668 403 ntBASIC6.65□□□□□ -1.34
MRE11P49959 AC011330.2-201ENST00000621680 635 ntBASIC6.65□□□□□ -1.34
MRE11P49959 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.65□□□□□ -1.34
MRE11P49959 AL512506.2-201ENST00000624472 458 ntBASIC6.65□□□□□ -1.34
MRE11P49959 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
MRE11P49959 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
MRE11P49959 AL354854.1-201ENST00000455940 1363 ntBASIC6.65□□□□□ -1.35
MRE11P49959 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
MRE11P49959 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.65□□□□□ -1.35
MRE11P49959 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
MRE11P49959 AL022393.1-201ENST00000625142 1677 ntBASIC6.65□□□□□ -1.35
MRE11P49959 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
MRE11P49959 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
MRE11P49959 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
MRE11P49959 AC092681.1-201ENST00000297369 291 ntBASIC6.64□□□□□ -1.35
MRE11P49959 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 OR10R3P-201ENST00000361688 942 ntBASIC6.64□□□□□ -1.35
MRE11P49959 RNA5SP477-201ENST00000362639 119 ntBASIC6.64□□□□□ -1.35
MRE11P49959 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.64□□□□□ -1.35
MRE11P49959 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 U3.28-201ENST00000391249 210 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AL049545.1-201ENST00000401856 572 ntBASIC6.64□□□□□ -1.35
MRE11P49959 HNRNPDP2-201ENST00000406475 478 ntBASIC6.64□□□□□ -1.35
MRE11P49959 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.64□□□□□ -1.35
MRE11P49959 CBX1P3-201ENST00000413296 527 ntBASIC6.64□□□□□ -1.35
MRE11P49959 TRIM60P5Y-201ENST00000413946 574 ntBASIC6.64□□□□□ -1.35
MRE11P49959 MTATP6P20-201ENST00000414147 562 ntBASIC6.64□□□□□ -1.35
MRE11P49959 MTCYBP7-201ENST00000419540 1134 ntBASIC6.64□□□□□ -1.35
MRE11P49959 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.64□□□□□ -1.35
MRE11P49959 TNPO1P1-201ENST00000423641 1138 ntBASIC6.64□□□□□ -1.35
MRE11P49959 VN1R21P-201ENST00000426703 765 ntBASIC6.64□□□□□ -1.35
MRE11P49959 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
MRE11P49959 MTND2P21-201ENST00000436242 1042 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.64□□□□□ -1.35
MRE11P49959 AC245047.2-201ENST00000441060 530 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.64□□□□□ -1.35
MRE11P49959 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.64□□□□□ -1.35
MRE11P49959 AP002345.1-201ENST00000456493 928 ntBASIC6.64□□□□□ -1.35
MRE11P49959 RPL12P30-201ENST00000488389 499 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.64□□□□□ -1.35
MRE11P49959 OR9N1P-202ENST00000494289 481 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.64□□□□□ -1.35
MRE11P49959 PPM1AP1-201ENST00000502740 1135 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.64□□□□□ -1.35
MRE11P49959 OR51K1P-201ENST00000510214 950 ntBASIC6.64□□□□□ -1.35
MRE11P49959 RNU6-311P-201ENST00000516224 102 ntBASIC6.64□□□□□ -1.35
MRE11P49959 AC005000.1-201ENST00000536192 288 ntBASIC6.64□□□□□ -1.35
MRE11P49959 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms