Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC068714.1-201ENST00000559623 800 ntBASIC4.59□□□□□ -1.67
CDX1P47902 NMNAT1P5-201ENST00000559657 841 ntBASIC4.59□□□□□ -1.67
CDX1P47902 BX005019.1-201ENST00000561881 1810 ntBASIC4.59□□□□□ -1.67
CDX1P47902 RBM22P12-201ENST00000567098 1255 ntBASIC4.59□□□□□ -1.67
CDX1P47902 MIR3614-201ENST00000581261 86 ntBASIC4.59□□□□□ -1.67
CDX1P47902 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.59□□□□□ -1.67
CDX1P47902 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDX1P47902 AF230666.2-201ENST00000602328 725 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.59□□□□□ -1.67
CDX1P47902 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.59□□□□□ -1.67
CDX1P47902 AC055764.2-201ENST00000610089 670 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AL163051.2-201ENST00000618976 735 ntBASIC4.59□□□□□ -1.67
CDX1P47902 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.59□□□□□ -1.67
CDX1P47902 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.59□□□□□ -1.67
CDX1P47902 AP001005.3-201ENST00000622049 129 ntBASIC4.59□□□□□ -1.67
CDX1P47902 TMEM30CP-203ENST00000637814 1035 ntBASIC4.59□□□□□ -1.67
CDX1P47902 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.59□□□□□ -1.67
CDX1P47902 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDX1P47902 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDX1P47902 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
CDX1P47902 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.59□□□□□ -1.68
CDX1P47902 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.58□□□□□ -1.68
CDX1P47902 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.58□□□□□ -1.68
CDX1P47902 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.58□□□□□ -1.68
CDX1P47902 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 MIR375-201ENST00000362103 64 ntBASIC4.58□□□□□ -1.68
CDX1P47902 RNU4-44P-201ENST00000363050 141 ntBASIC4.58□□□□□ -1.68
CDX1P47902 SNORA62.2-201ENST00000364672 152 ntBASIC4.58□□□□□ -1.68
CDX1P47902 RN7SKP28-201ENST00000364770 305 ntBASIC4.58□□□□□ -1.68
CDX1P47902 RNU6-304P-201ENST00000364855 107 ntBASIC4.58□□□□□ -1.68
CDX1P47902 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDX1P47902 AL031985.1-201ENST00000392713 418 ntBASIC4.58□□□□□ -1.68
CDX1P47902 NCSTNP1-201ENST00000406229 144 ntBASIC4.58□□□□□ -1.68
CDX1P47902 RNU2-50P-201ENST00000410494 143 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC245060.4-201ENST00000413293 1121 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AL354890.1-201ENST00000413730 346 ntBASIC4.58□□□□□ -1.68
CDX1P47902 SDHDP6-201ENST00000414693 480 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AL133482.1-201ENST00000415988 498 ntBASIC4.58□□□□□ -1.68
CDX1P47902 NIFKP3-201ENST00000417799 865 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.58□□□□□ -1.68
CDX1P47902 MTND6P12-201ENST00000428247 522 ntBASIC4.58□□□□□ -1.68
CDX1P47902 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.58□□□□□ -1.68
CDX1P47902 AL359265.1-201ENST00000440296 795 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC097499.1-201ENST00000444277 208 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.58□□□□□ -1.68
CDX1P47902 RPL31P44-201ENST00000447680 377 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC092685.1-201ENST00000447960 1243 ntBASIC4.58□□□□□ -1.68
CDX1P47902 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDX1P47902 ACA64.4-201ENST00000459070 127 ntBASIC4.58□□□□□ -1.68
CDX1P47902 METTL15P1-201ENST00000481421 1045 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AL049874.2-201ENST00000492636 288 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC111193.1-201ENST00000504097 155 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 MTATP6P1-201ENST00000514057 681 ntBASIC4.58□□□□□ -1.68
CDX1P47902 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 SNORA70.20-201ENST00000516848 126 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.58□□□□□ -1.68
CDX1P47902 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDX1P47902 AC092451.2-201ENST00000538746 658 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 AL163952.1-202ENST00000569625 600 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC090079.2-201ENST00000575289 768 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 MIR4260-201ENST00000583107 67 ntBASIC4.58□□□□□ -1.68
CDX1P47902 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.58□□□□□ -1.68
CDX1P47902 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.58□□□□□ -1.68
CDX1P47902 AC027243.2-201ENST00000602530 724 ntBASIC4.58□□□□□ -1.68
CDX1P47902 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.58□□□□□ -1.68
CDX1P47902 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.58□□□□□ -1.68
CDX1P47902 AC127024.6-201ENST00000621598 424 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC021766.1-201ENST00000624404 741 ntBASIC4.58□□□□□ -1.68
CDX1P47902 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.58□□□□□ -1.68
CDX1P47902 AL355480.1-201ENST00000629041 99 ntBASIC4.58□□□□□ -1.68
CDX1P47902 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
CDX1P47902 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms