Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD4P46934 TVP23CP2-201ENST00000571473 623 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.8□□□□□ -1.48
NEDD4P46934 AC016590.3-201ENST00000611171 753 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 AC015914.2-201ENST00000618167 288 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 AF117829.2-201ENST00000619538 361 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.8□□□□□ -1.48
NEDD4P46934 AC138965.3-201ENST00000623875 498 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 AC063952.1-203ENST00000634410 658 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.8□□□□□ -1.48
NEDD4P46934 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 TCP11X1-202ENST00000622971 1372 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.8□□□□□ -1.48
NEDD4P46934 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
NEDD4P46934 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.8□□□□□ -1.48
NEDD4P46934 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NEDD4P46934 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
NEDD4P46934 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.8□□□□□ -1.48
NEDD4P46934 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NEDD4P46934 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.79□□□□□ -1.48
NEDD4P46934 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NEDD4P46934 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD4P46934 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NEDD4P46934 RNA5SP191-201ENST00000362585 102 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 MIR550A3-201ENST00000390735 95 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
NEDD4P46934 RNA5SP345-201ENST00000410646 108 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 AC013429.2-201ENST00000418798 781 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.79□□□□□ -1.48
NEDD4P46934 AC004074.1-201ENST00000421810 1063 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 OR6C71P-201ENST00000432580 913 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 KATNBL1P2-201ENST00000433311 835 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.79□□□□□ -1.48
NEDD4P46934 AC010733.1-201ENST00000451515 401 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.79□□□□□ -1.48
NEDD4P46934 RPL7P16-201ENST00000479738 738 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.79□□□□□ -1.48
NEDD4P46934 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD4P46934 AC105031.1-201ENST00000518550 476 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.79□□□□□ -1.48
NEDD4P46934 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.79□□□□□ -1.48
NEDD4P46934 AL031320.1-201ENST00000604177 357 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 FAM25E-202ENST00000608562 189 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 Z95327.3-201ENST00000610385 572 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 AP000648.2-201ENST00000624182 404 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD4P46934 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.79□□□□□ -1.48
NEDD4P46934 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NEDD4P46934 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.79□□□□□ -1.48
NEDD4P46934 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NEDD4P46934 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.79□□□□□ -1.48
NEDD4P46934 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
NEDD4P46934 AC008758.3-201ENST00000507003 1829 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NEDD4P46934 SAMMSON-226ENST00000642089 1582 ntBASIC5.79□□□□□ -1.48
NEDD4P46934 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
NEDD4P46934 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
NEDD4P46934 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.79□□□□□ -1.48
NEDD4P46934 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 SCARNA15-201ENST00000607520 4325 ntBASIC5.78□□□□□ -1.48
NEDD4P46934 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.78□□□□□ -1.48
NEDD4P46934 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
NEDD4P46934 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD4P46934 PRPF38AP2-201ENST00000438179 851 ntBASIC5.78□□□□□ -1.48
NEDD4P46934 MTCO3P17-201ENST00000443775 513 ntBASIC5.78□□□□□ -1.48
NEDD4P46934 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD4P46934 RPL31P44-201ENST00000447680 377 ntBASIC5.78□□□□□ -1.48
NEDD4P46934 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD4P46934 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.78□□□□□ -1.48
NEDD4P46934 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.78□□□□□ -1.48
NEDD4P46934 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD4P46934 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 AC091917.2-201ENST00000505002 744 ntBASIC5.78□□□□□ -1.48
NEDD4P46934 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.78□□□□□ -1.48
NEDD4P46934 AL049839.1-201ENST00000556151 657 ntBASIC5.78□□□□□ -1.48
NEDD4P46934 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.78□□□□□ -1.48
NEDD4P46934 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.78□□□□□ -1.48
NEDD4P46934 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.78□□□□□ -1.48
NEDD4P46934 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 AC132825.1-201ENST00000463573 2247 ntBASIC5.78□□□□□ -1.48
NEDD4P46934 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
NEDD4P46934 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
NEDD4P46934 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NEDD4P46934 AC099654.3-201ENST00000447087 1546 ntBASIC5.78□□□□□ -1.48
NEDD4P46934 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms