Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6-1263P-201ENST00000384601 106 ntBASIC4.97□□□□□ -1.61
RORAP35398 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.97□□□□□ -1.61
RORAP35398 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RORAP35398 OR51A6P-201ENST00000418680 1004 ntBASIC4.97□□□□□ -1.61
RORAP35398 AC093162.1-201ENST00000419682 124 ntBASIC4.97□□□□□ -1.61
RORAP35398 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 RPS4XP16-201ENST00000427198 791 ntBASIC4.97□□□□□ -1.61
RORAP35398 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.97□□□□□ -1.61
RORAP35398 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.97□□□□□ -1.61
RORAP35398 AC012512.1-201ENST00000446594 718 ntBASIC4.97□□□□□ -1.61
RORAP35398 RN7SL591P-201ENST00000496150 292 ntBASIC4.97□□□□□ -1.61
RORAP35398 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 NDUFB5P1-201ENST00000508134 564 ntBASIC4.97□□□□□ -1.61
RORAP35398 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 AC110775.1-201ENST00000513721 462 ntBASIC4.97□□□□□ -1.61
RORAP35398 OR10D4P-201ENST00000525892 951 ntBASIC4.97□□□□□ -1.61
RORAP35398 AP001804.2-201ENST00000533932 910 ntBASIC4.97□□□□□ -1.61
RORAP35398 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 AC233702.9-201ENST00000581528 203 ntBASIC4.97□□□□□ -1.61
RORAP35398 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 AC010632.3-201ENST00000611377 369 ntBASIC4.97□□□□□ -1.61
RORAP35398 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 AC011755.1-201ENST00000623763 2049 ntBASIC4.97□□□□□ -1.61
RORAP35398 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 Z95331.1-201ENST00000623075 23112 ntBASIC4.97□□□□□ -1.61
RORAP35398 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RORAP35398 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.97□□□□□ -1.61
RORAP35398 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.96□□□□□ -1.61
RORAP35398 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RORAP35398 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.96□□□□□ -1.62
RORAP35398 RNU4-44P-201ENST00000363050 141 ntBASIC4.96□□□□□ -1.62
RORAP35398 RN7SKP153-201ENST00000365026 316 ntBASIC4.96□□□□□ -1.62
RORAP35398 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
RORAP35398 MIR600-201ENST00000385007 98 ntBASIC4.96□□□□□ -1.62
RORAP35398 VDAC2P1-201ENST00000399358 958 ntBASIC4.96□□□□□ -1.62
RORAP35398 MIR1182-201ENST00000408363 97 ntBASIC4.96□□□□□ -1.62
RORAP35398 CTSL3P-202ENST00000412179 788 ntBASIC4.96□□□□□ -1.62
RORAP35398 RPS26P13-201ENST00000419030 330 ntBASIC4.96□□□□□ -1.62
RORAP35398 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.96□□□□□ -1.62
RORAP35398 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RORAP35398 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.96□□□□□ -1.62
RORAP35398 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.96□□□□□ -1.62
RORAP35398 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.96□□□□□ -1.62
RORAP35398 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 AC092647.3-201ENST00000443044 633 ntBASIC4.96□□□□□ -1.62
RORAP35398 AC016772.1-201ENST00000444170 1261 ntBASIC4.96□□□□□ -1.62
RORAP35398 AC097484.1-201ENST00000471148 389 ntBASIC4.96□□□□□ -1.62
RORAP35398 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 IGBP1P4-201ENST00000503202 879 ntBASIC4.96□□□□□ -1.62
RORAP35398 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 AC004980.4-201ENST00000513375 203 ntBASIC4.96□□□□□ -1.62
RORAP35398 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.96□□□□□ -1.62
RORAP35398 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.96□□□□□ -1.62
RORAP35398 AC012400.1-201ENST00000518452 381 ntBASIC4.96□□□□□ -1.62
RORAP35398 AC018442.3-201ENST00000523025 183 ntBASIC4.96□□□□□ -1.62
RORAP35398 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.96□□□□□ -1.62
RORAP35398 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.96□□□□□ -1.62
RORAP35398 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.96□□□□□ -1.62
RORAP35398 OR1F2P-201ENST00000570470 933 ntBASIC4.96□□□□□ -1.62
RORAP35398 MIR4700-201ENST00000578311 74 ntBASIC4.96□□□□□ -1.62
RORAP35398 AL137072.1-201ENST00000603444 466 ntBASIC4.96□□□□□ -1.62
RORAP35398 AC108738.1-201ENST00000603703 237 ntBASIC4.96□□□□□ -1.62
RORAP35398 AL162431.4-201ENST00000604674 411 ntBASIC4.96□□□□□ -1.62
RORAP35398 AC116651.1-201ENST00000609724 556 ntBASIC4.96□□□□□ -1.62
RORAP35398 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RORAP35398 ZNF652P1-201ENST00000442420 1309 ntBASIC4.96□□□□□ -1.62
RORAP35398 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.96□□□□□ -1.62
RORAP35398 NEAT1-202ENST00000501122 22743 ntBASIC4.96□□□□□ -1.62
RORAP35398 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RORAP35398 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RORAP35398 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.95□□□□□ -1.62
RORAP35398 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RORAP35398 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RORAP35398 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RORAP35398 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
RORAP35398 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RORAP35398 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.95□□□□□ -1.62
RORAP35398 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RORAP35398 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RORAP35398 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms