Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXA9P31269 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXA9P31269 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXA9P31269 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXA9P31269 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
HOXA9P31269 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HOXA9P31269 RN7SKP100-201ENST00000411258 284 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 AC119751.6-201ENST00000416712 186 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 AC092570.3-201ENST00000420113 693 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 AL136231.1-201ENST00000429407 730 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 RPL7AP49-201ENST00000429522 581 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 AL591438.1-201ENST00000433508 581 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXA9P31269 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXA9P31269 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXA9P31269 AC073264.2-201ENST00000448886 166 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXA9P31269 AC006967.1-201ENST00000467608 589 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXA9P31269 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXA9P31269 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXA9P31269 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXA9P31269 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.3□□□□□ -1.56
HOXA9P31269 AC068790.7-201ENST00000602347 528 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 AL512782.1-201ENST00000603093 364 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 AL133406.3-201ENST00000606817 541 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 MIR6839-201ENST00000620425 113 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.3□□□□□ -1.56
HOXA9P31269 AC016542.2-201ENST00000624201 619 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HOXA9P31269 AC132825.8-201ENST00000640783 297 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
HOXA9P31269 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HOXA9P31269 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXA9P31269 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA9P31269 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
HOXA9P31269 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXA9P31269 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HOXA9P31269 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
HOXA9P31269 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
HOXA9P31269 RNA5SP223-201ENST00000365174 120 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 RPL10P10-201ENST00000403509 664 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AL136116.2-201ENST00000404020 785 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 RPS16P5-201ENST00000406501 404 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA9P31269 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA9P31269 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.29□□□□□ -1.56
HOXA9P31269 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA9P31269 BX323845.1-201ENST00000432417 179 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AL359265.2-201ENST00000434367 631 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AC093414.1-201ENST00000434712 514 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA9P31269 RPS29P9-201ENST00000440360 171 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA9P31269 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA9P31269 TCEA1P1-201ENST00000449716 880 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA9P31269 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA9P31269 TAAR4P-201ENST00000454843 1039 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AC096741.1-201ENST00000472250 846 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 AC011005.3-201ENST00000491624 395 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AC008897.1-201ENST00000494006 347 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA9P31269 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA9P31269 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA9P31269 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.29□□□□□ -1.56
HOXA9P31269 AP006289.1-201ENST00000538089 277 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA9P31269 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA9P31269 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA9P31269 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA9P31269 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXA9P31269 BNIP3P35-201ENST00000604530 490 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA9P31269 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA9P31269 AP005435.3-201ENST00000531260 3198 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 AC002525.1-201ENST00000624392 1622 ntBASIC5.29□□□□□ -1.56
HOXA9P31269 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms