Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 AC126755.2-208ENST00000327792 462 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 AC138969.1-213ENST00000331436 462 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 SNORA70.2-201ENST00000364506 135 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA6P31267 AC007068.1-201ENST00000396690 844 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA6P31267 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
HOXA6P31267 OR7E125P-201ENST00000443450 846 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 CYCSP42-201ENST00000450823 238 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA6P31267 AC104849.1-201ENST00000462623 405 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 AC020779.1-201ENST00000478757 796 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA6P31267 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA6P31267 RNA5SP43-201ENST00000516559 110 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXA6P31267 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXA6P31267 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA6P31267 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA6P31267 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA6P31267 NPM1P42-201ENST00000560329 862 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXA6P31267 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 AP001267.4-201ENST00000602598 545 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 AC244107.2-201ENST00000611773 76 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
HOXA6P31267 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA6P31267 AC000095.2-202ENST00000637415 154 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA6P31267 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 AC021242.1-201ENST00000507315 2035 ntBASIC5.16□□□□□ -1.58
HOXA6P31267 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA6P31267 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA6P31267 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA6P31267 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA6P31267 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXA6P31267 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.15□□□□□ -1.58
HOXA6P31267 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA6P31267 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA6P31267 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXA6P31267 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXA6P31267 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA6P31267 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA6P31267 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
HOXA6P31267 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 GNG5P2-201ENST00000372054 207 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 RNA5SP187-201ENST00000384400 119 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 SNORA66-201ENST00000384792 133 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 HMGB3P7-201ENST00000400214 611 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 RN7SKP100-201ENST00000411258 284 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXA6P31267 RPL18P10-201ENST00000425606 538 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 AL450263.2-201ENST00000439400 589 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA6P31267 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA6P31267 AC234781.3-201ENST00000452540 973 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA6P31267 AC092905.1-201ENST00000467527 949 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 RN7SL354P-201ENST00000469282 294 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXA6P31267 RPL23AP72-201ENST00000492447 435 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
HOXA6P31267 RPS24P16-201ENST00000497294 392 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA6P31267 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA6P31267 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA6P31267 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXA6P31267 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA6P31267 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA6P31267 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA6P31267 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA6P31267 AL512782.1-201ENST00000603093 364 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 AC105254.2-201ENST00000603636 436 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA6P31267 AC091932.2-201ENST00000623014 291 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
HOXA6P31267 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
HOXA6P31267 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXA6P31267 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA6P31267 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
HOXA6P31267 AC245100.2-201ENST00000454544 1679 ntBASIC5.15□□□□□ -1.59
HOXA6P31267 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA6P31267 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA6P31267 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA6P31267 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA6P31267 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms