Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TM4SF1P30408 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TM4SF1P30408 AL049693.1-201ENST00000402760 611 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF1P30408 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.25□□□□□ -1.41
TM4SF1P30408 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.25□□□□□ -1.41
TM4SF1P30408 RAB9AP5-201ENST00000437794 597 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 RPS29P9-201ENST00000440360 171 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 RAB9AP2-201ENST00000443911 597 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 AC090804.1-201ENST00000448870 490 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 AC010733.1-201ENST00000451515 401 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.25□□□□□ -1.41
TM4SF1P30408 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.25□□□□□ -1.41
TM4SF1P30408 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF1P30408 RPS12P31-201ENST00000491419 398 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.25□□□□□ -1.41
TM4SF1P30408 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.25□□□□□ -1.41
TM4SF1P30408 SCARNA22-201ENST00000503991 125 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC6.25□□□□□ -1.41
TM4SF1P30408 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF1P30408 ENPP7P9-201ENST00000514456 627 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 AC117525.1-201ENST00000515228 503 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 RN7SKP67-201ENST00000515905 235 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.25□□□□□ -1.41
TM4SF1P30408 AC026616.1-201ENST00000523157 525 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
TM4SF1P30408 DPPA3P2-201ENST00000553589 478 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF1P30408 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.25□□□□□ -1.41
TM4SF1P30408 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.25□□□□□ -1.41
TM4SF1P30408 AC093765.1-201ENST00000603758 881 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 BNIP3P35-201ENST00000604530 490 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 AC007497.1-201ENST00000610421 561 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 AL138960.1-201ENST00000613838 513 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 AC005618.4-201ENST00000625053 554 ntBASIC6.25□□□□□ -1.41
TM4SF1P30408 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TM4SF1P30408 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TM4SF1P30408 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.24□□□□□ -1.41
TM4SF1P30408 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF1P30408 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TM4SF1P30408 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF1P30408 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF1P30408 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF1P30408 MIR7-1-201ENST00000384871 110 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF1P30408 ARAFP1-201ENST00000422172 605 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 AC004975.1-201ENST00000428733 208 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 Z85994.2-201ENST00000434327 452 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 AC073143.1-201ENST00000436316 395 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF1P30408 MTND6P5-201ENST00000448266 512 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF1P30408 TAAR4P-201ENST00000454843 1039 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.24□□□□□ -1.41
TM4SF1P30408 RPL31P53-201ENST00000457065 348 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 snoU13.29-201ENST00000459370 104 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 AC091153.1-201ENST00000466297 402 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.24□□□□□ -1.41
TM4SF1P30408 AC012339.2-201ENST00000523996 453 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.24□□□□□ -1.41
TM4SF1P30408 AL110118.1-201ENST00000553543 400 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC6.24□□□□□ -1.41
TM4SF1P30408 AL356218.2-201ENST00000605264 187 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF1P30408 AC005962.2-201ENST00000611427 652 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.24□□□□□ -1.41
TM4SF1P30408 AL157762.1-201ENST00000619612 415 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 AC241377.1-201ENST00000619797 406 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF1P30408 MIR6839-201ENST00000620425 113 ntBASIC6.24□□□□□ -1.41
TM4SF1P30408 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF1P30408 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF1P30408 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF1P30408 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
TM4SF1P30408 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.24□□□□□ -1.41
TM4SF1P30408 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF1P30408 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
TM4SF1P30408 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
TM4SF1P30408 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF1P30408 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.24□□□□□ -1.41
TM4SF1P30408 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TM4SF1P30408 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
TM4SF1P30408 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF1P30408 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF1P30408 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF1P30408 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF1P30408 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF1P30408 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF1P30408 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
TM4SF1P30408 SNORD113.2-201ENST00000364166 89 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms