Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MTCYBP23-201ENST00000558717 1102 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.64□□□□□ -1.35
CNGA1P29973 AC119403.2-201ENST00000590960 598 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 IMMP1LP3-201ENST00000604197 224 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.64□□□□□ -1.35
CNGA1P29973 AC145207.9-201ENST00000623802 325 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 AL390318.1-201ENST00000624564 687 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.64□□□□□ -1.35
CNGA1P29973 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.64□□□□□ -1.35
CNGA1P29973 OR11H2-202ENST00000641517 1085 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CNGA1P29973 FBXL21-201ENST00000297158 1305 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.64□□□□□ -1.35
CNGA1P29973 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.64□□□□□ -1.35
CNGA1P29973 AC114786.1-201ENST00000512892 1415 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
CNGA1P29973 MTCO1P15-201ENST00000529569 1526 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 VPS35P1-201ENST00000563400 1518 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CNGA1P29973 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNGA1P29973 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
CNGA1P29973 AC020656.2-201ENST00000613291 5309 ntBASIC6.64□□□□□ -1.35
CNGA1P29973 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
CNGA1P29973 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNGA1P29973 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNGA1P29973 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
CNGA1P29973 SRRM1P3-201ENST00000426911 2678 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CNGA1P29973 AL591135.1-201ENST00000401578 5914 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
CNGA1P29973 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CNGA1P29973 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
CNGA1P29973 RPL23AP59-201ENST00000399415 461 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AP000357.1-201ENST00000409926 1165 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 RN7SKP222-201ENST00000410651 315 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 VTA1P1-201ENST00000414044 866 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.63□□□□□ -1.35
CNGA1P29973 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.63□□□□□ -1.35
CNGA1P29973 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC6.63□□□□□ -1.35
CNGA1P29973 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 EIF2S2P2-201ENST00000447161 982 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.63□□□□□ -1.35
CNGA1P29973 RPL35AP19-201ENST00000469425 329 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 SSR3-206ENST00000476217 807 ntTSL 3 BASIC6.63□□□□□ -1.35
CNGA1P29973 RN7SL826P-201ENST00000479724 288 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AC004815.1-201ENST00000484185 331 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
CNGA1P29973 AC098862.1-201ENST00000504991 413 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.63□□□□□ -1.35
CNGA1P29973 RNU6-1028P-201ENST00000517164 93 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.63□□□□□ -1.35
CNGA1P29973 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.63□□□□□ -1.35
CNGA1P29973 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 AP000619.2-201ENST00000546014 969 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.63□□□□□ -1.35
CNGA1P29973 TXNP4-201ENST00000575018 310 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 MIR4260-201ENST00000583107 67 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.63□□□□□ -1.35
CNGA1P29973 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC6.63□□□□□ -1.35
CNGA1P29973 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.63□□□□□ -1.35
CNGA1P29973 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.63□□□□□ -1.35
CNGA1P29973 AC098935.2-201ENST00000604222 466 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AC096586.1-201ENST00000610267 561 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.63□□□□□ -1.35
CNGA1P29973 MIR7155-201ENST00000615925 56 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AL035461.2-201ENST00000619201 524 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AC007342.8-201ENST00000623278 678 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 AC006963.1-201ENST00000624003 1052 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.63□□□□□ -1.35
CNGA1P29973 AC139713.2-210ENST00000641741 992 ntBASIC6.63□□□□□ -1.35
CNGA1P29973 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
CNGA1P29973 AL137141.1-201ENST00000624622 4836 ntBASIC6.62□□□□□ -1.35
CNGA1P29973 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CNGA1P29973 AC007342.5-201ENST00000571340 2142 ntBASIC6.62□□□□□ -1.35
CNGA1P29973 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CNGA1P29973 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.62□□□□□ -1.35
CNGA1P29973 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CNGA1P29973 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CNGA1P29973 NLRP3P1-201ENST00000622303 1785 ntBASIC6.62□□□□□ -1.35
CNGA1P29973 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.62□□□□□ -1.35
CNGA1P29973 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CNGA1P29973 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CNGA1P29973 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CNGA1P29973 AC232271.1-201ENST00000602455 2715 ntBASIC6.62□□□□□ -1.35
CNGA1P29973 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CNGA1P29973 RNA5SP443-201ENST00000363083 132 ntBASIC6.62□□□□□ -1.35
CNGA1P29973 RNU6-236P-201ENST00000363886 106 ntBASIC6.62□□□□□ -1.35
CNGA1P29973 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.62□□□□□ -1.35
CNGA1P29973 AL445213.1-201ENST00000412589 747 ntBASIC6.62□□□□□ -1.35
CNGA1P29973 AC015977.1-201ENST00000418887 292 ntBASIC6.62□□□□□ -1.35
CNGA1P29973 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC6.62□□□□□ -1.35
CNGA1P29973 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.62□□□□□ -1.35
CNGA1P29973 AC099677.3-201ENST00000427081 395 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms