Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MIR1250-201ENST00000408098 113 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC114760.1-201ENST00000420310 652 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC091390.2-201ENST00000432573 374 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.16□□□□□ -1.42
VAMP1P23763 AC099344.1-201ENST00000433548 492 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC244505.2-201ENST00000435089 759 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC6.16□□□□□ -1.42
VAMP1P23763 NEFLP1-201ENST00000436364 984 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 RPL5P27-201ENST00000437011 881 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.16□□□□□ -1.42
VAMP1P23763 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.16□□□□□ -1.42
VAMP1P23763 AC239798.1-201ENST00000449024 1176 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 IGKV1OR2-2-201ENST00000451163 355 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 snoU13.8-201ENST00000458890 104 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.16□□□□□ -1.42
VAMP1P23763 RN7SL520P-201ENST00000474110 286 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AL445187.1-201ENST00000502685 260 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC027338.2-201ENST00000504382 526 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.16□□□□□ -1.42
VAMP1P23763 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.16□□□□□ -1.42
VAMP1P23763 AC138517.1-201ENST00000515724 568 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 SNORA18.6-201ENST00000516792 115 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 RN7SKP277-201ENST00000516895 283 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.16□□□□□ -1.42
VAMP1P23763 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.16□□□□□ -1.42
VAMP1P23763 DEFB108A-201ENST00000530110 222 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC6.16□□□□□ -1.42
VAMP1P23763 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC6.16□□□□□ -1.42
VAMP1P23763 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 AC005841.1-201ENST00000547042 287 ntTSL 3 BASIC6.16□□□□□ -1.42
VAMP1P23763 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.16□□□□□ -1.42
VAMP1P23763 PPIAP6-201ENST00000557078 499 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 IGHV1OR15-4-201ENST00000560037 348 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 IGHV1OR15-3-201ENST00000564926 351 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC6.16□□□□□ -1.42
VAMP1P23763 ANP32BP1-202ENST00000568553 737 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC090615.1-201ENST00000577519 154 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC6.16□□□□□ -1.42
VAMP1P23763 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC6.16□□□□□ -1.42
VAMP1P23763 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC6.16□□□□□ -1.42
VAMP1P23763 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.16□□□□□ -1.42
VAMP1P23763 AC019322.2-201ENST00000605634 147 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 AL135999.3-201ENST00000610501 812 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 Metazoa_SRP.120-201ENST00000614195 252 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 AC072046.2-201ENST00000618366 268 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC6.16□□□□□ -1.42
VAMP1P23763 AC134981.1-201ENST00000628076 348 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.16□□□□□ -1.42
VAMP1P23763 AC110994.2-201ENST00000635481 492 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.16□□□□□ -1.42
VAMP1P23763 DLD-205ENST00000440410 1993 ntTSL 2 BASIC6.16□□□□□ -1.42
VAMP1P23763 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 AOX3P-204ENST00000491025 2107 ntBASIC6.16□□□□□ -1.42
VAMP1P23763 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
VAMP1P23763 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VAMP1P23763 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VAMP1P23763 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.15□□□□□ -1.42
VAMP1P23763 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
VAMP1P23763 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.15□□□□□ -1.42
VAMP1P23763 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VAMP1P23763 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VAMP1P23763 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.15□□□□□ -1.42
VAMP1P23763 RBP2-201ENST00000232217 694 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VAMP1P23763 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VAMP1P23763 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC6.15□□□□□ -1.42
VAMP1P23763 RACK1-201ENST00000376817 965 ntTSL 5 BASIC6.15□□□□□ -1.42
VAMP1P23763 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VAMP1P23763 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
VAMP1P23763 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
VAMP1P23763 MIR199B-201ENST00000384849 110 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
VAMP1P23763 AC234778.1-201ENST00000399253 370 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 YWHAZP6-201ENST00000399764 738 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 TANK-206ENST00000406287 875 ntTSL 5 BASIC6.15□□□□□ -1.42
VAMP1P23763 GAS8-AS1-201ENST00000408886 435 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 RPS3AP3-201ENST00000411933 242 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 RBMY2JP-201ENST00000425544 1059 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 PSMA6P3-201ENST00000428242 164 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 RPS3AP38-201ENST00000435889 763 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 AL391987.3-201ENST00000441101 719 ntTSL 5 BASIC6.15□□□□□ -1.42
VAMP1P23763 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC6.15□□□□□ -1.42
VAMP1P23763 GRM8-206ENST00000444921 1251 ntTSL 3 BASIC6.15□□□□□ -1.42
VAMP1P23763 MTND1P1-201ENST00000445453 368 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 AC004980.3-201ENST00000447046 365 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 NOP56P2-201ENST00000447491 769 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 AP000542.1-201ENST00000448473 371 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC6.15□□□□□ -1.42
VAMP1P23763 RPL18AP2-201ENST00000450007 482 ntBASIC6.15□□□□□ -1.42
VAMP1P23763 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC6.15□□□□□ -1.42
VAMP1P23763 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms