Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.32□□□□□ -1.56
TNFSF4P23510 AC009464.1-201ENST00000615731 469 ntBASIC5.32□□□□□ -1.56
TNFSF4P23510 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.32□□□□□ -1.56
TNFSF4P23510 AL035661.1-201ENST00000620459 1144 ntBASIC5.32□□□□□ -1.56
TNFSF4P23510 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.32□□□□□ -1.56
TNFSF4P23510 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TNFSF4P23510 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.32□□□□□ -1.56
TNFSF4P23510 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.32□□□□□ -1.56
TNFSF4P23510 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TNFSF4P23510 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.32□□□□□ -1.56
TNFSF4P23510 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
TNFSF4P23510 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.32□□□□□ -1.56
TNFSF4P23510 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TNFSF4P23510 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TNFSF4P23510 AC027575.3-201ENST00000583058 2747 ntBASIC5.32□□□□□ -1.56
TNFSF4P23510 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TNFSF4P23510 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 CCNT2P1-201ENST00000423082 1315 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 NACA3P-201ENST00000359690 648 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TNFSF4P23510 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 RNU6-1151P-201ENST00000384684 107 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 AL445238.1-204ENST00000400311 463 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 FCF1P5-201ENST00000406490 482 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 RNA5SP156-201ENST00000410250 110 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 PAICSP7-201ENST00000419829 962 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 PSMD10P2-201ENST00000432890 672 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 GTF2IP7-202ENST00000436677 309 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF4P23510 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 EEF1A1P1-201ENST00000447052 739 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 HMGB1P16-201ENST00000447155 540 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF4P23510 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 RN7SL168P-201ENST00000463821 279 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 RPL12P30-201ENST00000488389 499 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AC114322.1-201ENST00000506771 926 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF4P23510 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 AC112673.1-201ENST00000513168 575 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AC092593.2-201ENST00000513866 913 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 ZNF519P4-201ENST00000514008 125 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 RNA5SP206-201ENST00000516703 121 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF4P23510 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 RPA2P3-201ENST00000533268 770 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.31□□□□□ -1.56
TNFSF4P23510 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 HSPE1P2-201ENST00000554777 306 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF4P23510 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.31□□□□□ -1.56
TNFSF4P23510 AP001269.3-201ENST00000588718 329 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.31□□□□□ -1.56
TNFSF4P23510 MTND3P19-201ENST00000603825 345 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.31□□□□□ -1.56
TNFSF4P23510 AC025588.2-201ENST00000604851 466 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 MIR6780B-201ENST00000610307 79 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 U1.25-201ENST00000614085 162 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AC079395.3-201ENST00000615161 484 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 uc_338.31-201ENST00000615595 186 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AL162574.1-201ENST00000615702 950 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AL122125.1-201ENST00000616999 600 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 MIR6721-201ENST00000617181 87 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AC005840.5-201ENST00000619166 599 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 FAM27E2-201ENST00000619668 403 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.31□□□□□ -1.56
TNFSF4P23510 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.31□□□□□ -1.56
TNFSF4P23510 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TNFSF4P23510 AL451142.2-201ENST00000429076 2090 ntBASIC5.31□□□□□ -1.56
TNFSF4P23510 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms