Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.37□□□□□ -1.71
CTLA4P16410 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 MTHFD2P5-201ENST00000320415 844 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 AL357515.1-201ENST00000402967 542 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 NPM1P40-201ENST00000412758 733 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 BMS1P13-201ENST00000417301 885 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 AF186996.5-201ENST00000418098 904 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.36□□□□□ -1.71
CTLA4P16410 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.36□□□□□ -1.71
CTLA4P16410 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.36□□□□□ -1.71
CTLA4P16410 AC020937.1-201ENST00000519677 1013 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 AC022832.1-201ENST00000530718 645 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.36□□□□□ -1.71
CTLA4P16410 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.36□□□□□ -1.71
CTLA4P16410 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.36□□□□□ -1.71
CTLA4P16410 RN7SL435P-201ENST00000584418 282 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 LINC01739-205ENST00000641890 573 ntBASIC4.36□□□□□ -1.71
CTLA4P16410 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.36□□□□□ -1.71
CTLA4P16410 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.36□□□□□ -1.71
CTLA4P16410 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.36□□□□□ -1.71
CTLA4P16410 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CTLA4P16410 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.36□□□□□ -1.71
CTLA4P16410 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.36□□□□□ -1.71
CTLA4P16410 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CTLA4P16410 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTLA4P16410 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.36□□□□□ -1.71
CTLA4P16410 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CTLA4P16410 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.35□□□□□ -1.71
CTLA4P16410 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTLA4P16410 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTLA4P16410 SNORA51.1-201ENST00000363243 140 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 RNA5SP428-201ENST00000365129 132 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 RNU1-106P-201ENST00000384382 164 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 RN7SKP273-201ENST00000411392 314 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.35□□□□□ -1.71
CTLA4P16410 RPL36AP10-201ENST00000421785 322 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 AL355433.1-201ENST00000422804 300 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 CKS1BP6-201ENST00000424932 240 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.35□□□□□ -1.71
CTLA4P16410 AL137845.2-201ENST00000444292 988 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 AC000111.2-201ENST00000448200 210 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 RHEBP2-201ENST00000450289 600 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.35□□□□□ -1.71
CTLA4P16410 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.35□□□□□ -1.71
CTLA4P16410 AC004980.4-201ENST00000513375 203 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 OR8A2P-201ENST00000528631 952 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.35□□□□□ -1.71
CTLA4P16410 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTLA4P16410 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.35□□□□□ -1.71
CTLA4P16410 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.35□□□□□ -1.71
CTLA4P16410 TVP23CP2-201ENST00000571473 623 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.35□□□□□ -1.71
CTLA4P16410 SUMO2P15-201ENST00000604285 278 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 MEMO1P5-201ENST00000604810 406 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 AL139041.1-201ENST00000605480 610 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 AL451049.1-201ENST00000608672 497 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 AC093799.2-201ENST00000610062 578 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
CTLA4P16410 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.35□□□□□ -1.71
CTLA4P16410 DDX18P5-201ENST00000534547 1306 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 AC010266.2-201ENST00000564741 3255 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CTLA4P16410 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 NAMPTP1-201ENST00000440465 2514 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTLA4P16410 AL590763.1-201ENST00000398297 1545 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.35□□□□□ -1.71
CTLA4P16410 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.35□□□□□ -1.71
CTLA4P16410 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.35□□□□□ -1.71
CTLA4P16410 AC008758.3-201ENST00000507003 1829 ntBASIC4.35□□□□□ -1.71
CTLA4P16410 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.34□□□□□ -1.71
CTLA4P16410 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.34□□□□□ -1.71
CTLA4P16410 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CTLA4P16410 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CTLA4P16410 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CTLA4P16410 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms