Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC022726.1-201ENST00000587475 207 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.51□□□□□ -1.53
COL11A1P12107 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
COL11A1P12107 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
COL11A1P12107 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 Z98755.1-201ENST00000407015 1384 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 AC133552.1-201ENST00000569988 4007 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 AL360270.2-201ENST00000562952 5985 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL11A1P12107 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL11A1P12107 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.51□□□□□ -1.53
COL11A1P12107 RPL18P10-201ENST00000425606 538 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.51□□□□□ -1.53
COL11A1P12107 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.51□□□□□ -1.53
COL11A1P12107 AC128716.1-201ENST00000475129 166 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 AC104763.1-201ENST00000475274 360 ntBASIC5.51□□□□□ -1.53
COL11A1P12107 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.51□□□□□ -1.53
COL11A1P12107 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.51□□□□□ -1.53
COL11A1P12107 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.51□□□□□ -1.53
COL11A1P12107 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.51□□□□□ -1.53
COL11A1P12107 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL11A1P12107 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL11A1P12107 AC091046.3-201ENST00000631455 1574 ntBASIC5.5□□□□□ -1.53
COL11A1P12107 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL11A1P12107 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL11A1P12107 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL11A1P12107 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL11A1P12107 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL11A1P12107 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.5□□□□□ -1.53
COL11A1P12107 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
COL11A1P12107 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL11A1P12107 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL11A1P12107 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.5□□□□□ -1.53
COL11A1P12107 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.5□□□□□ -1.53
COL11A1P12107 AP005432.1-201ENST00000580891 3485 ntBASIC5.5□□□□□ -1.53
COL11A1P12107 RN7SKP267-201ENST00000410381 285 ntBASIC5.5□□□□□ -1.53
COL11A1P12107 AC073143.1-201ENST00000436316 395 ntBASIC5.5□□□□□ -1.53
COL11A1P12107 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
COL11A1P12107 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.5□□□□□ -1.53
COL11A1P12107 AC011276.1-201ENST00000469688 323 ntBASIC5.5□□□□□ -1.53
COL11A1P12107 RNU1-6P-201ENST00000516290 144 ntBASIC5.5□□□□□ -1.53
COL11A1P12107 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.5□□□□□ -1.53
COL11A1P12107 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.5□□□□□ -1.53
COL11A1P12107 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL11A1P12107 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL11A1P12107 OR52H1-202ENST00000641796 1061 ntBASIC5.5□□□□□ -1.53
COL11A1P12107 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL11A1P12107 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.5□□□□□ -1.53
COL11A1P12107 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.5□□□□□ -1.53
COL11A1P12107 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.5□□□□□ -1.53
COL11A1P12107 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL11A1P12107 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL11A1P12107 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.49□□□□□ -1.53
COL11A1P12107 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
COL11A1P12107 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL11A1P12107 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL11A1P12107 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
COL11A1P12107 SNORA62-201ENST00000365493 153 ntBASIC5.49□□□□□ -1.53
COL11A1P12107 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.49□□□□□ -1.53
COL11A1P12107 AC007064.3-201ENST00000422608 359 ntBASIC5.49□□□□□ -1.53
COL11A1P12107 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.49□□□□□ -1.53
COL11A1P12107 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.49□□□□□ -1.53
COL11A1P12107 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.49□□□□□ -1.53
COL11A1P12107 RN7SKP92-201ENST00000517266 244 ntBASIC5.49□□□□□ -1.53
COL11A1P12107 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.49□□□□□ -1.53
COL11A1P12107 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.49□□□□□ -1.53
COL11A1P12107 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.49□□□□□ -1.53
COL11A1P12107 AC093249.4-201ENST00000564755 259 ntBASIC5.49□□□□□ -1.53
COL11A1P12107 AP001153.1-201ENST00000641024 338 ntBASIC5.49□□□□□ -1.53
COL11A1P12107 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL11A1P12107 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.49□□□□□ -1.53
COL11A1P12107 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.49□□□□□ -1.53
COL11A1P12107 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.49□□□□□ -1.53
COL11A1P12107 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.49□□□□□ -1.53
COL11A1P12107 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.49□□□□□ -1.53
COL11A1P12107 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
COL11A1P12107 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL11A1P12107 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL11A1P12107 AC008758.3-201ENST00000507003 1829 ntBASIC5.49□□□□□ -1.53
COL11A1P12107 PCAT14-202ENST00000627127 3935 ntBASIC5.49□□□□□ -1.53
COL11A1P12107 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL11A1P12107 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.48□□□□□ -1.53
COL11A1P12107 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.48□□□□□ -1.53
COL11A1P12107 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.48□□□□□ -1.53
COL11A1P12107 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.48□□□□□ -1.53
COL11A1P12107 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.48□□□□□ -1.53
COL11A1P12107 AC115286.1-201ENST00000604298 434 ntBASIC5.48□□□□□ -1.53
COL11A1P12107 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms