Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 AC090771.1-201ENST00000585803 1618 ntBASIC6.81□□□□□ -1.32
THBS1P07996 GNG5P1-201ENST00000255500 204 ntBASIC6.81□□□□□ -1.32
THBS1P07996 RN7SKP63-201ENST00000363187 301 ntBASIC6.81□□□□□ -1.32
THBS1P07996 Y_RNA.259-201ENST00000364619 101 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 GAGE12E-201ENST00000381698 520 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 RNU1-39P-201ENST00000383897 165 ntBASIC6.81□□□□□ -1.32
THBS1P07996 RNU4-70P-201ENST00000384579 139 ntBASIC6.81□□□□□ -1.32
THBS1P07996 MIR181C-201ENST00000384881 110 ntBASIC6.81□□□□□ -1.32
THBS1P07996 SNORD115.1-201ENST00000391109 76 ntBASIC6.81□□□□□ -1.32
THBS1P07996 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.81□□□□□ -1.32
THBS1P07996 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.81□□□□□ -1.32
THBS1P07996 RN7SKP131-201ENST00000410698 301 ntBASIC6.81□□□□□ -1.32
THBS1P07996 RNU6-195P-201ENST00000411352 109 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 RPL7P57-201ENST00000423238 740 ntBASIC6.81□□□□□ -1.32
THBS1P07996 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.81□□□□□ -1.32
THBS1P07996 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.81□□□□□ -1.32
THBS1P07996 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 NPM1P18-201ENST00000434232 732 ntBASIC6.81□□□□□ -1.32
THBS1P07996 RPL7P29-201ENST00000437151 728 ntBASIC6.81□□□□□ -1.32
THBS1P07996 CYP2C56P-201ENST00000440076 291 ntBASIC6.81□□□□□ -1.32
THBS1P07996 RPL23AP16-201ENST00000441715 421 ntBASIC6.81□□□□□ -1.32
THBS1P07996 RPSAP49-201ENST00000445182 886 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 AC114755.1-201ENST00000453101 868 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.81□□□□□ -1.32
THBS1P07996 AC040975.1-201ENST00000472104 316 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC104687.1-201ENST00000485829 412 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC066616.1-201ENST00000486795 413 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 RPL17P2-201ENST00000491913 451 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC106872.3-201ENST00000495104 446 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC090638.1-201ENST00000498296 909 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 AC093325.1-201ENST00000508378 326 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 RNU6-445P-201ENST00000516949 107 ntBASIC6.81□□□□□ -1.32
THBS1P07996 RPL10P18-201ENST00000519384 309 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC6.81□□□□□ -1.32
THBS1P07996 AP000790.1-201ENST00000528891 737 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC6.81□□□□□ -1.32
THBS1P07996 CYCSP2-201ENST00000558168 301 ntBASIC6.81□□□□□ -1.32
THBS1P07996 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 AC006270.2-201ENST00000578523 652 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.81□□□□□ -1.32
THBS1P07996 MIR4307-201ENST00000582802 84 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC009955.2-201ENST00000597288 542 ntBASIC6.81□□□□□ -1.32
THBS1P07996 AC244153.1-204ENST00000615582 401 ntTSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 HDAC1P1-201ENST00000455482 1445 ntBASIC6.81□□□□□ -1.32
THBS1P07996 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
THBS1P07996 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.81□□□□□ -1.32
THBS1P07996 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
THBS1P07996 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.81□□□□□ -1.32
THBS1P07996 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
THBS1P07996 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
THBS1P07996 DDX10P2-201ENST00000417796 2614 ntBASIC6.8□□□□□ -1.32
THBS1P07996 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.8□□□□□ -1.32
THBS1P07996 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
THBS1P07996 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
THBS1P07996 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
THBS1P07996 SALL4P7-201ENST00000555779 3120 ntBASIC6.8□□□□□ -1.32
THBS1P07996 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.8□□□□□ -1.32
THBS1P07996 RBMX2P2-201ENST00000257020 946 ntBASIC6.8□□□□□ -1.32
THBS1P07996 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
THBS1P07996 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
THBS1P07996 AC011155.1-201ENST00000316512 456 ntBASIC6.8□□□□□ -1.32
THBS1P07996 OR51L1-201ENST00000321543 948 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
THBS1P07996 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
THBS1P07996 MIR369-201ENST00000362155 70 ntBASIC6.8□□□□□ -1.32
THBS1P07996 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
THBS1P07996 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms