Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOEP02649 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
APOEP02649 AC093162.1-201ENST00000419682 124 ntBASIC5.31□□□□□ -1.56
APOEP02649 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.31□□□□□ -1.56
APOEP02649 PTMAP6-201ENST00000439110 327 ntBASIC5.31□□□□□ -1.56
APOEP02649 AC092647.3-201ENST00000443044 633 ntBASIC5.31□□□□□ -1.56
APOEP02649 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.31□□□□□ -1.56
APOEP02649 AL591623.2-201ENST00000449978 222 ntBASIC5.31□□□□□ -1.56
APOEP02649 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.31□□□□□ -1.56
APOEP02649 BX284632.1-201ENST00000478218 541 ntBASIC5.31□□□□□ -1.56
APOEP02649 AC004980.4-201ENST00000513375 203 ntBASIC5.31□□□□□ -1.56
APOEP02649 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.31□□□□□ -1.56
APOEP02649 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.31□□□□□ -1.56
APOEP02649 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.31□□□□□ -1.56
APOEP02649 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.31□□□□□ -1.56
APOEP02649 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.31□□□□□ -1.56
APOEP02649 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.31□□□□□ -1.56
APOEP02649 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.31□□□□□ -1.56
APOEP02649 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
APOEP02649 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
APOEP02649 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOEP02649 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
APOEP02649 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
APOEP02649 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.3□□□□□ -1.56
APOEP02649 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
APOEP02649 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.3□□□□□ -1.56
APOEP02649 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.3□□□□□ -1.56
APOEP02649 RN7SKP16-201ENST00000410180 299 ntBASIC5.3□□□□□ -1.56
APOEP02649 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.3□□□□□ -1.56
APOEP02649 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.3□□□□□ -1.56
APOEP02649 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.3□□□□□ -1.56
APOEP02649 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
APOEP02649 KNOP1P3-201ENST00000446933 426 ntBASIC5.3□□□□□ -1.56
APOEP02649 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 HMGN2P25-201ENST00000486956 268 ntBASIC5.3□□□□□ -1.56
APOEP02649 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.3□□□□□ -1.56
APOEP02649 RN7SKP147-201ENST00000517154 244 ntBASIC5.3□□□□□ -1.56
APOEP02649 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.3□□□□□ -1.56
APOEP02649 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.3□□□□□ -1.56
APOEP02649 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.3□□□□□ -1.56
APOEP02649 EIF3FP1-201ENST00000613970 806 ntBASIC5.3□□□□□ -1.56
APOEP02649 MIR7155-201ENST00000615925 56 ntBASIC5.3□□□□□ -1.56
APOEP02649 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
APOEP02649 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.3□□□□□ -1.56
APOEP02649 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.3□□□□□ -1.56
APOEP02649 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
APOEP02649 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
APOEP02649 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
APOEP02649 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOEP02649 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
APOEP02649 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
APOEP02649 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOEP02649 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
APOEP02649 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOEP02649 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
APOEP02649 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.29□□□□□ -1.56
APOEP02649 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOEP02649 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
APOEP02649 RNU4-4P-201ENST00000364588 130 ntBASIC5.29□□□□□ -1.56
APOEP02649 SNORA2.3-201ENST00000383920 135 ntBASIC5.29□□□□□ -1.56
APOEP02649 SNORA66-201ENST00000384792 133 ntBASIC5.29□□□□□ -1.56
APOEP02649 AL035079.1-201ENST00000405210 287 ntBASIC5.29□□□□□ -1.56
APOEP02649 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.29□□□□□ -1.56
APOEP02649 CTSL3P-202ENST00000412179 788 ntBASIC5.29□□□□□ -1.56
APOEP02649 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.29□□□□□ -1.56
APOEP02649 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.29□□□□□ -1.56
APOEP02649 AL354714.3-201ENST00000447284 493 ntBASIC5.29□□□□□ -1.56
APOEP02649 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.29□□□□□ -1.56
APOEP02649 RN7SL346P-201ENST00000491561 294 ntBASIC5.29□□□□□ -1.56
APOEP02649 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.29□□□□□ -1.56
APOEP02649 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.29□□□□□ -1.56
APOEP02649 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.29□□□□□ -1.56
APOEP02649 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC5.29□□□□□ -1.56
APOEP02649 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.29□□□□□ -1.56
APOEP02649 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.29□□□□□ -1.56
APOEP02649 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.29□□□□□ -1.56
APOEP02649 AC093799.2-201ENST00000610062 578 ntBASIC5.29□□□□□ -1.56
APOEP02649 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.29□□□□□ -1.56
APOEP02649 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.29□□□□□ -1.56
APOEP02649 AC068870.2-201ENST00000620635 389 ntBASIC5.29□□□□□ -1.56
APOEP02649 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
APOEP02649 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOEP02649 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
APOEP02649 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.29□□□□□ -1.56
APOEP02649 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
APOEP02649 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
APOEP02649 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
APOEP02649 CASC19-281ENST00000642118 1554 ntBASIC5.29□□□□□ -1.56
APOEP02649 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
APOEP02649 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
APOEP02649 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.28□□□□□ -1.56
APOEP02649 LINC01355-201ENST00000566551 5444 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms