Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RPL21P67-201ENST00000402896 478 ntBASIC5.81□□□□□ -1.48
COL4A1P02462 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.81□□□□□ -1.48
COL4A1P02462 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A1P02462 AC004980.3-201ENST00000447046 365 ntBASIC5.81□□□□□ -1.48
COL4A1P02462 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.81□□□□□ -1.48
COL4A1P02462 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.81□□□□□ -1.48
COL4A1P02462 AC138701.1-201ENST00000524329 714 ntBASIC5.81□□□□□ -1.48
COL4A1P02462 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL4A1P02462 AC067959.1-201ENST00000604334 379 ntBASIC5.81□□□□□ -1.48
COL4A1P02462 MIR6830-201ENST00000636015 70 ntBASIC5.81□□□□□ -1.48
COL4A1P02462 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
COL4A1P02462 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL4A1P02462 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL4A1P02462 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL4A1P02462 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL4A1P02462 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A1P02462 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A1P02462 MAPK10-371ENST00000641952 5209 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A1P02462 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL4A1P02462 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A1P02462 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A1P02462 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.8□□□□□ -1.48
COL4A1P02462 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL4A1P02462 OR14L1P-202ENST00000641545 3009 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 VN1R37P-201ENST00000419096 748 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A1P02462 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 RN7SL517P-201ENST00000462240 305 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 RPL21P126-201ENST00000470049 478 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A1P02462 RNU1-6P-201ENST00000516290 144 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.8□□□□□ -1.48
COL4A1P02462 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A1P02462 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A1P02462 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.8□□□□□ -1.48
COL4A1P02462 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A1P02462 AP000919.1-201ENST00000582850 985 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A1P02462 AC093765.1-201ENST00000603758 881 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A1P02462 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A1P02462 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL4A1P02462 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A1P02462 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
COL4A1P02462 SNX18P3-202ENST00000565670 1750 ntBASIC5.8□□□□□ -1.48
COL4A1P02462 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A1P02462 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A1P02462 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC5.8□□□□□ -1.48
COL4A1P02462 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL4A1P02462 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A1P02462 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
COL4A1P02462 AC023141.6-201ENST00000429418 337 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A1P02462 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A1P02462 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A1P02462 AL356218.2-201ENST00000605264 187 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 AC016717.3-201ENST00000624730 554 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 U3.53-201ENST00000628922 216 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A1P02462 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
COL4A1P02462 AC107068.1-201ENST00000563286 4218 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A1P02462 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 STX3-208ENST00000641815 3236 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A1P02462 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
COL4A1P02462 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A1P02462 RNU1-130P-201ENST00000363930 160 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 RNA5SP509-201ENST00000364577 119 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 ST13P16-201ENST00000401760 781 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.79□□□□□ -1.48
COL4A1P02462 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL4A1P02462 AC020937.1-201ENST00000519677 1013 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 RN7SL652P-201ENST00000577769 300 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 MIR3138-201ENST00000585238 82 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 AC243960.7-201ENST00000623532 707 ntBASIC5.79□□□□□ -1.48
COL4A1P02462 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A1P02462 AC109446.4-201ENST00000623235 2755 ntBASIC5.78□□□□□ -1.48
COL4A1P02462 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A1P02462 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.78□□□□□ -1.48
COL4A1P02462 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL4A1P02462 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
COL4A1P02462 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A1P02462 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A1P02462 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A1P02462 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
COL4A1P02462 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A1P02462 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
COL4A1P02462 AL591848.1-201ENST00000413092 322 ntBASIC5.78□□□□□ -1.48
COL4A1P02462 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL4A1P02462 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.78□□□□□ -1.48
COL4A1P02462 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.78□□□□□ -1.48
COL4A1P02462 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.78□□□□□ -1.48
COL4A1P02462 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.78□□□□□ -1.48
COL4A1P02462 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.78□□□□□ -1.48
COL4A1P02462 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.78□□□□□ -1.48
COL4A1P02462 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms