Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLPTM1O96005 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLPTM1O96005 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.99□□□□□ -1.61
CLPTM1O96005 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC106872.5-201ENST00000508856 1416 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.99□□□□□ -1.61
CLPTM1O96005 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.99□□□□□ -1.61
CLPTM1O96005 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC096644.3-201ENST00000416788 338 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.99□□□□□ -1.61
CLPTM1O96005 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.99□□□□□ -1.61
CLPTM1O96005 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.99□□□□□ -1.61
CLPTM1O96005 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 AC007998.1-201ENST00000474156 672 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.99□□□□□ -1.61
CLPTM1O96005 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.99□□□□□ -1.61
CLPTM1O96005 UGT2A3P7-201ENST00000510485 734 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.99□□□□□ -1.61
CLPTM1O96005 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC105031.1-201ENST00000518550 476 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.99□□□□□ -1.61
CLPTM1O96005 HMGN2P36-201ENST00000529541 409 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLPTM1O96005 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.99□□□□□ -1.61
CLPTM1O96005 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.99□□□□□ -1.61
CLPTM1O96005 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC096996.1-201ENST00000563813 325 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.99□□□□□ -1.61
CLPTM1O96005 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC015802.2-201ENST00000589690 189 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.99□□□□□ -1.61
CLPTM1O96005 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.99□□□□□ -1.61
CLPTM1O96005 AC119674.1-220ENST00000641502 1048 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLPTM1O96005 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
CLPTM1O96005 AL138820.1-201ENST00000617901 5305 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 AC104118.1-201ENST00000607625 1589 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 AC107027.3-201ENST00000565095 3473 ntBASIC4.99□□□□□ -1.61
CLPTM1O96005 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CLPTM1O96005 SCN1A-220ENST00000641603 12506 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.98□□□□□ -1.61
CLPTM1O96005 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.98□□□□□ -1.61
CLPTM1O96005 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLPTM1O96005 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.98□□□□□ -1.61
CLPTM1O96005 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CLPTM1O96005 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLPTM1O96005 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLPTM1O96005 OR9G4-201ENST00000302957 984 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 GAPDHP24-201ENST00000328713 983 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CLPTM1O96005 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CLPTM1O96005 MARK2P12-201ENST00000420129 585 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 ARAFP1-201ENST00000422172 605 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 RPL23AP19-201ENST00000436229 369 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC022795.1-201ENST00000473808 480 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC025768.1-201ENST00000510057 267 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
CLPTM1O96005 SNORA70.20-201ENST00000516848 126 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CLPTM1O96005 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC005000.1-201ENST00000536192 288 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 AC079600.1-201ENST00000550326 297 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.98□□□□□ -1.61
CLPTM1O96005 MIR4311-201ENST00000580794 100 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 MIR3614-201ENST00000581261 86 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 BNIP3P39-201ENST00000601077 554 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.98□□□□□ -1.61
CLPTM1O96005 AC135803.1-201ENST00000608748 565 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 AC244107.2-201ENST00000611773 76 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 AC090607.5-201ENST00000615692 224 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 LINC00216-201ENST00000623548 1126 ntBASIC4.98□□□□□ -1.61
CLPTM1O96005 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.98□□□□□ -1.61
CLPTM1O96005 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms