Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 OR52B5P-202ENST00000641118 1110 ntBASIC4.89□□□□□ -1.63
CLDN9O95484 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN9O95484 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN9O95484 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN9O95484 AC003985.2-201ENST00000562268 1669 ntBASIC4.89□□□□□ -1.63
CLDN9O95484 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN9O95484 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN9O95484 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLDN9O95484 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 AP000542.2-201ENST00000623199 6179 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN9O95484 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN9O95484 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 Y_RNA.62-201ENST00000362840 99 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 AC013442.1-201ENST00000397347 228 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 GAPDHP15-201ENST00000398586 975 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 SEPT7P8-201ENST00000413308 775 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN9O95484 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN9O95484 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN9O95484 AL157385.1-201ENST00000446973 268 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 MTND6P32-201ENST00000457611 483 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN9O95484 RPS4XP14-201ENST00000493072 781 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN9O95484 SNORA26.10-201ENST00000516427 141 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.88□□□□□ -1.63
CLDN9O95484 RPL23AP53-201ENST00000521854 457 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 HNRNPRP2-201ENST00000528421 743 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN9O95484 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN9O95484 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 AC116553.2-201ENST00000564203 463 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.88□□□□□ -1.63
CLDN9O95484 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 IMMP1LP3-201ENST00000604197 224 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 AL512329.2-201ENST00000607350 548 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 AC037198.3-201ENST00000616754 526 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 AC099494.2-201ENST00000623371 978 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 AP002505.2-201ENST00000623585 696 ntBASIC4.88□□□□□ -1.63
CLDN9O95484 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CLDN9O95484 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.88□□□□□ -1.63
CLDN9O95484 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.88□□□□□ -1.63
CLDN9O95484 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLDN9O95484 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN9O95484 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN9O95484 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN9O95484 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CLDN9O95484 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN9O95484 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLDN9O95484 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLDN9O95484 AL391361.1-201ENST00000405580 489 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 CTSL3P-202ENST00000412179 788 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 OR5M12P-201ENST00000423388 929 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN9O95484 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN9O95484 BX323845.1-201ENST00000432417 179 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 AL450023.3-201ENST00000440592 271 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 AL354714.3-201ENST00000447284 493 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 AL606490.1-201ENST00000452266 765 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 AL356981.1-201ENST00000454879 684 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 RN7SL177P-201ENST00000476596 299 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 AP000926.3-201ENST00000497201 299 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN9O95484 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN9O95484 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN9O95484 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN9O95484 ATP5LP3-201ENST00000514223 304 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 AP002981.1-201ENST00000517692 975 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 EIF4A2P5-201ENST00000529914 499 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN9O95484 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.87□□□□□ -1.63
CLDN9O95484 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.87□□□□□ -1.63
CLDN9O95484 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN9O95484 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN9O95484 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN9O95484 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.87□□□□□ -1.63
CLDN9O95484 AC126915.2-201ENST00000610957 190 ntBASIC4.87□□□□□ -1.63
CLDN9O95484 AL158062.1-201ENST00000619632 745 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms