Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MIR4789-201ENST00000577469 82 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 MIR1273E-201ENST00000581165 102 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 FAM106CP-201ENST00000582212 507 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS4BO75351 PCNAP1-202ENST00000595299 752 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.75□□□□□ -1.49
VPS4BO75351 AP002906.1-201ENST00000603405 233 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 AC107952.2-201ENST00000606048 486 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 AL645933.2-201ENST00000606743 1207 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 RNU6-84P-201ENST00000607737 102 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 RNA5SP439-201ENST00000617595 124 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS4BO75351 AC026422.1-201ENST00000623961 452 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 AC005618.4-201ENST00000625053 554 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS4BO75351 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS4BO75351 AC017007.4-201ENST00000503353 1352 ntBASIC5.75□□□□□ -1.49
VPS4BO75351 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
VPS4BO75351 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
VPS4BO75351 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS4BO75351 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
VPS4BO75351 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS4BO75351 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS4BO75351 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.75□□□□□ -1.49
VPS4BO75351 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VPS4BO75351 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.75□□□□□ -1.49
VPS4BO75351 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VPS4BO75351 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VPS4BO75351 NF1-214ENST00000490416 1329 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS4BO75351 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
VPS4BO75351 AC138907.8-201ENST00000623981 2256 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VPS4BO75351 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 AC015689.2-201ENST00000528172 1738 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
VPS4BO75351 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS4BO75351 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VPS4BO75351 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VPS4BO75351 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 SNORA74A-201ENST00000364089 198 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 RNA5SP105-201ENST00000391123 113 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VPS4BO75351 SDHDP6-201ENST00000414693 480 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AL449283.1-202ENST00000418249 604 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC023128.2-201ENST00000420880 1223 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS4BO75351 BX510359.3-201ENST00000422168 306 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC093084.1-201ENST00000424233 687 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS4BO75351 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 BX276092.6-201ENST00000430476 250 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 GTF2IP3-201ENST00000433887 494 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 MTND2P22-201ENST00000444325 1033 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 SEPT14P24-201ENST00000447236 180 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS4BO75351 VN1R40P-201ENST00000455196 941 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 BX276092.8-201ENST00000455722 250 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS4BO75351 RPS20P4-201ENST00000461659 355 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS4BO75351 RPS27AP16-201ENST00000492222 470 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS4BO75351 AC093815.1-201ENST00000508637 280 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS4BO75351 AC026782.2-201ENST00000510845 636 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS4BO75351 ATP5LP3-201ENST00000514223 304 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 IGKV2-18-201ENST00000522607 343 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS4BO75351 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS4BO75351 AC087897.1-201ENST00000550134 156 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC068305.2-201ENST00000550567 1205 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS4BO75351 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS4BO75351 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.74□□□□□ -1.49
VPS4BO75351 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS4BO75351 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS4BO75351 AC012254.4-201ENST00000588843 273 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS4BO75351 AL035411.2-201ENST00000604022 421 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC025588.2-201ENST00000604851 466 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 NANOGP3-201ENST00000605855 286 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 FAM72A-208ENST00000607379 1139 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AL021707.7-201ENST00000607991 416 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 OR2BH1P-201ENST00000608850 864 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AL159169.2-201ENST00000610061 1269 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 RFPL4AP6-201ENST00000616792 846 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS4BO75351 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS4BO75351 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS4BO75351 AC114774.1-201ENST00000507410 1770 ntBASIC5.74□□□□□ -1.49
VPS4BO75351 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms