Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 AC021451.1-201ENST00000523498 1129 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.95□□□□□ -1.62
ZIC3O60481 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 AC008126.1-201ENST00000549019 480 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 DUX4L52-201ENST00000549363 777 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ZIC3O60481 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.95□□□□□ -1.62
ZIC3O60481 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.95□□□□□ -1.62
ZIC3O60481 AL606834.3-201ENST00000602615 496 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 AC025175.1-201ENST00000606482 759 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 OR7A19P-201ENST00000608051 733 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 AC245100.7-201ENST00000609678 442 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 AL512624.1-201ENST00000613638 469 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.95□□□□□ -1.62
ZIC3O60481 AL158062.1-201ENST00000619632 745 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 AC097520.1-201ENST00000624435 385 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.95□□□□□ -1.62
ZIC3O60481 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.95□□□□□ -1.62
ZIC3O60481 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 AC006927.2-201ENST00000639256 389 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 AC073869.8-201ENST00000641806 335 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.95□□□□□ -1.62
ZIC3O60481 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
ZIC3O60481 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 AC007342.7-201ENST00000624610 2337 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 AC092451.3-201ENST00000625067 1343 ntBASIC4.95□□□□□ -1.62
ZIC3O60481 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ZIC3O60481 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
ZIC3O60481 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 SNORD56.4-201ENST00000363883 71 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 RNU11-201ENST00000387069 134 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 RNU1-77P-201ENST00000390868 162 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 SNORA79B-201ENST00000410557 148 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 AL390774.1-201ENST00000411924 246 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.94□□□□□ -1.62
ZIC3O60481 DPPA2P2-201ENST00000418220 897 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 AC115285.1-201ENST00000424879 736 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.94□□□□□ -1.62
ZIC3O60481 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 AC011225.1-201ENST00000457751 369 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 RPS26P39-201ENST00000469206 341 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.94□□□□□ -1.62
ZIC3O60481 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.94□□□□□ -1.62
ZIC3O60481 GLUD1P3-202ENST00000508551 200 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 HMGB1P44-201ENST00000508597 572 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 AC021106.1-201ENST00000509020 1058 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 ASNSP4-201ENST00000511103 447 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 AC126177.5-201ENST00000549599 178 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.94□□□□□ -1.62
ZIC3O60481 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.94□□□□□ -1.62
ZIC3O60481 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.94□□□□□ -1.62
ZIC3O60481 AP000919.1-202ENST00000581139 1264 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 AL360012.1-201ENST00000602813 131 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 AP002802.2-201ENST00000605877 235 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.94□□□□□ -1.62
ZIC3O60481 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.94□□□□□ -1.62
ZIC3O60481 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 AC136428.4-201ENST00000634254 1155 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 AL590396.4-201ENST00000636779 956 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 AC000095.2-202ENST00000637415 154 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.94□□□□□ -1.62
ZIC3O60481 AC079776.5-201ENST00000641920 211 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 AC092070.2-203ENST00000598377 3644 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
ZIC3O60481 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 AP000432.2-201ENST00000624164 2048 ntBASIC4.94□□□□□ -1.62
ZIC3O60481 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
ZIC3O60481 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ZIC3O60481 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ZIC3O60481 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
ZIC3O60481 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.93□□□□□ -1.62
ZIC3O60481 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ZIC3O60481 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms