Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.59□□□□□ -1.51
MSI1O43347 AL139124.1-201ENST00000609123 421 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC005618.4-201ENST00000625053 554 ntBASIC5.59□□□□□ -1.51
MSI1O43347 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 TMEM30CP-203ENST00000637814 1035 ntBASIC5.59□□□□□ -1.51
MSI1O43347 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.59□□□□□ -1.51
MSI1O43347 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 AC100757.1-201ENST00000616872 1835 ntBASIC5.59□□□□□ -1.51
MSI1O43347 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.59□□□□□ -1.51
MSI1O43347 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
MSI1O43347 MAPK10-328ENST00000641553 4009 ntBASIC5.59□□□□□ -1.51
MSI1O43347 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
MSI1O43347 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
MSI1O43347 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.58□□□□□ -1.52
MSI1O43347 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.58□□□□□ -1.52
MSI1O43347 OR55B1P-203ENST00000641518 2602 ntBASIC5.58□□□□□ -1.52
MSI1O43347 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
MSI1O43347 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
MSI1O43347 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
MSI1O43347 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 RNU6-1257P-201ENST00000384625 110 ntBASIC5.58□□□□□ -1.52
MSI1O43347 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
MSI1O43347 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 AL133482.1-201ENST00000415988 498 ntBASIC5.58□□□□□ -1.52
MSI1O43347 HMGN2P27-201ENST00000427352 270 ntBASIC5.58□□□□□ -1.52
MSI1O43347 GAPDHP25-201ENST00000447061 1001 ntBASIC5.58□□□□□ -1.52
MSI1O43347 AL157884.3-201ENST00000448273 1184 ntBASIC5.58□□□□□ -1.52
MSI1O43347 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.58□□□□□ -1.52
MSI1O43347 AC083899.1-201ENST00000454465 3819 ntBASIC5.58□□□□□ -1.52
MSI1O43347 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.58□□□□□ -1.52
MSI1O43347 RPL7P39-201ENST00000481157 744 ntBASIC5.58□□□□□ -1.52
MSI1O43347 AC008953.1-201ENST00000497334 318 ntBASIC5.58□□□□□ -1.52
MSI1O43347 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 HIGD1AP14-201ENST00000507617 282 ntBASIC5.58□□□□□ -1.52
MSI1O43347 RNA5SP92-201ENST00000516437 110 ntBASIC5.58□□□□□ -1.52
MSI1O43347 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.58□□□□□ -1.52
MSI1O43347 AC079064.1-201ENST00000528365 362 ntBASIC5.58□□□□□ -1.52
MSI1O43347 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.58□□□□□ -1.52
MSI1O43347 AC127381.1-201ENST00000555979 939 ntBASIC5.58□□□□□ -1.52
MSI1O43347 NMNAT1P5-201ENST00000559657 841 ntBASIC5.58□□□□□ -1.52
MSI1O43347 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.58□□□□□ -1.52
MSI1O43347 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.58□□□□□ -1.52
MSI1O43347 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 AC068620.3-201ENST00000602749 560 ntBASIC5.58□□□□□ -1.52
MSI1O43347 AL592494.3-201ENST00000609485 464 ntBASIC5.58□□□□□ -1.52
MSI1O43347 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.58□□□□□ -1.52
MSI1O43347 AP002505.2-201ENST00000623585 696 ntBASIC5.58□□□□□ -1.52
MSI1O43347 AC138965.3-201ENST00000623875 498 ntBASIC5.58□□□□□ -1.52
MSI1O43347 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
MSI1O43347 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
MSI1O43347 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
MSI1O43347 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.58□□□□□ -1.52
MSI1O43347 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
MSI1O43347 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.58□□□□□ -1.52
MSI1O43347 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 AC009962.1-201ENST00000567327 3813 ntBASIC5.58□□□□□ -1.52
MSI1O43347 C4BPAP1-201ENST00000415474 1893 ntBASIC5.58□□□□□ -1.52
MSI1O43347 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
MSI1O43347 AC006484.1-201ENST00000435086 1884 ntBASIC5.58□□□□□ -1.52
MSI1O43347 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.58□□□□□ -1.52
MSI1O43347 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.58□□□□□ -1.52
MSI1O43347 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.58□□□□□ -1.52
MSI1O43347 CR788268.1-201ENST00000603931 1809 ntBASIC5.58□□□□□ -1.52
MSI1O43347 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
MSI1O43347 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MSI1O43347 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MSI1O43347 AC011493.1-201ENST00000596753 1632 ntBASIC5.57□□□□□ -1.52
MSI1O43347 AC092681.1-201ENST00000297369 291 ntBASIC5.57□□□□□ -1.52
MSI1O43347 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
MSI1O43347 U3.7-201ENST00000363668 216 ntBASIC5.57□□□□□ -1.52
MSI1O43347 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
MSI1O43347 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
MSI1O43347 RNA5SP487-201ENST00000410186 122 ntBASIC5.57□□□□□ -1.52
MSI1O43347 RN7SKP278-201ENST00000410504 342 ntBASIC5.57□□□□□ -1.52
MSI1O43347 AL024507.1-201ENST00000412741 274 ntBASIC5.57□□□□□ -1.52
MSI1O43347 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.57□□□□□ -1.52
MSI1O43347 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.57□□□□□ -1.52
MSI1O43347 SLC35E1P1-201ENST00000419313 864 ntBASIC5.57□□□□□ -1.52
MSI1O43347 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.57□□□□□ -1.52
MSI1O43347 AC108075.1-201ENST00000424692 529 ntBASIC5.57□□□□□ -1.52
MSI1O43347 AC138761.5-201ENST00000433967 325 ntBASIC5.57□□□□□ -1.52
MSI1O43347 OR52B5P-201ENST00000435337 951 ntBASIC5.57□□□□□ -1.52
MSI1O43347 AL359265.1-201ENST00000440296 795 ntBASIC5.57□□□□□ -1.52
MSI1O43347 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.57□□□□□ -1.52
MSI1O43347 FAR2P1-206ENST00000449736 709 ntBASIC5.57□□□□□ -1.52
MSI1O43347 AURKAPS1-201ENST00000451805 1212 ntBASIC5.57□□□□□ -1.52
MSI1O43347 RN7SL799P-201ENST00000475891 298 ntBASIC5.57□□□□□ -1.52
MSI1O43347 GTF2IP9-201ENST00000502460 301 ntBASIC5.57□□□□□ -1.52
MSI1O43347 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms