Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SLC28A1O00337 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 OR51C1P-202ENST00000641159 1444 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 TMSB4XP4-201ENST00000323496 618 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SLC28A1O00337 U3.3-201ENST00000362986 216 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 RNU1-77P-201ENST00000390868 162 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AMZ2P2-201ENST00000406819 1057 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AL390774.1-201ENST00000411924 246 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC013429.2-201ENST00000418798 781 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC093655.2-201ENST00000425735 631 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.97□□□□□ -1.61
SLC28A1O00337 GAPDHP34-201ENST00000432112 823 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 CYCSP6-201ENST00000434498 302 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC28A1O00337 RPL35AP21-201ENST00000437667 333 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC28A1O00337 AL161636.2-201ENST00000445179 927 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC004980.3-201ENST00000447046 365 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 VN1R48P-201ENST00000448149 1036 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.97□□□□□ -1.61
SLC28A1O00337 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 AC005412.2-201ENST00000492004 341 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC28A1O00337 RPEP1-201ENST00000504507 658 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.97□□□□□ -1.61
SLC28A1O00337 AP006245.2-201ENST00000522004 300 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC28A1O00337 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 AC018442.3-201ENST00000523025 183 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 OR8A2P-201ENST00000528631 952 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.97□□□□□ -1.61
SLC28A1O00337 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.97□□□□□ -1.61
SLC28A1O00337 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 BX322635.1-201ENST00000605804 496 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 AP005131.7-201ENST00000610087 611 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 RNA5SP440-201ENST00000612665 119 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 MIR6778-201ENST00000617912 73 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC006840.1-201ENST00000623069 542 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC020763.5-201ENST00000623298 430 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC092159.4-201ENST00000624944 550 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AL139254.3-201ENST00000641097 674 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 AC073869.10-201ENST00000642016 354 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
SLC28A1O00337 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.97□□□□□ -1.61
SLC28A1O00337 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 THAP12P5-201ENST00000405864 2275 ntBASIC4.97□□□□□ -1.61
SLC28A1O00337 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
SLC28A1O00337 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SLC28A1O00337 AC063976.2-201ENST00000425667 3556 ntBASIC4.96□□□□□ -1.61
SLC28A1O00337 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SLC28A1O00337 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SLC28A1O00337 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SLC28A1O00337 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC28A1O00337 NPM1P10-201ENST00000398310 865 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC28A1O00337 CTSL3P-202ENST00000412179 788 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 SETP15-201ENST00000412724 337 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.96□□□□□ -1.62
SLC28A1O00337 SETP10-201ENST00000424368 814 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 AL139148.1-201ENST00000427122 680 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 CYCSP12-201ENST00000437729 300 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC28A1O00337 AP000281.1-201ENST00000444036 316 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SLC28A1O00337 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC28A1O00337 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
SLC28A1O00337 RPL7P6-201ENST00000480903 738 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 RN7SL466P-201ENST00000497546 295 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.96□□□□□ -1.62
SLC28A1O00337 RNU6-491P-201ENST00000516099 110 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 RNU6-941P-201ENST00000516346 108 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC28A1O00337 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC28A1O00337 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.96□□□□□ -1.62
SLC28A1O00337 NDUFB4P11-201ENST00000560510 395 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 MIR4472-2-201ENST00000582069 67 ntBASIC4.96□□□□□ -1.62
SLC28A1O00337 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.96□□□□□ -1.62
SLC28A1O00337 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
SLC28A1O00337 AC005229.3-201ENST00000603438 323 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms