Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AC136443.5-201ENST00000603741 370 ntBASIC7.55□□□□□ -1.2
CFAP99D6REC4 AC011468.4-201ENST00000603942 409 ntBASIC7.55□□□□□ -1.2
CFAP99D6REC4 AL031658.2-201ENST00000616850 651 ntBASIC7.55□□□□□ -1.2
CFAP99D6REC4 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC7.55□□□□□ -1.2
CFAP99D6REC4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.55□□□□□ -1.2
CFAP99D6REC4 AL356585.4-201ENST00000623078 1229 ntBASIC7.55□□□□□ -1.2
CFAP99D6REC4 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC7.55□□□□□ -1.2
CFAP99D6REC4 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CFAP99D6REC4 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
CFAP99D6REC4 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.55□□□□□ -1.2
CFAP99D6REC4 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.55□□□□□ -1.2
CFAP99D6REC4 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.55□□□□□ -1.2
CFAP99D6REC4 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC7.55□□□□□ -1.2
CFAP99D6REC4 SLC2A3P2-201ENST00000331747 1480 ntBASIC7.55□□□□□ -1.2
CFAP99D6REC4 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CFAP99D6REC4 CDY1-202ENST00000361963 2177 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 PPIA-204ENST00000468812 2238 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CFAP99D6REC4 OR5P1P-201ENST00000299512 925 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 OR5J1P-201ENST00000313544 939 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC005294.1-201ENST00000355509 281 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 RNU6-1120P-201ENST00000362988 108 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 RNA5SP483-201ENST00000363431 118 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 RNU6-777P-201ENST00000364265 104 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 RNU6-359P-201ENST00000365466 108 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 Y_RNA.387-201ENST00000383918 102 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC008171.1-201ENST00000395058 200 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 RNU6-272P-201ENST00000411028 104 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 VN1R33P-201ENST00000411800 887 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 GSTA10P-201ENST00000412182 576 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 NAP1L1P2-201ENST00000414182 1089 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC104837.2-201ENST00000427236 424 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 DDX11L10-201ENST00000430178 571 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AL606489.2-201ENST00000433886 234 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 RPSAP49-201ENST00000445182 886 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 FGF7P3-201ENST00000454645 303 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 PTMAP1-205ENST00000455552 325 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CFAP99D6REC4 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC011352.2-201ENST00000514574 1016 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 OR7E87P-201ENST00000532397 929 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 GSTM3-206ENST00000540225 678 ntTSL 5 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 BMS1P15-201ENST00000554269 1141 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC090751.1-201ENST00000566966 267 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 MTCYBP13-201ENST00000578634 1093 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC009027.1-201ENST00000604510 479 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AL391903.2-201ENST00000614532 247 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 uc_338.33-201ENST00000614988 170 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC025162.2-201ENST00000619602 560 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 C2orf27A-204ENST00000623058 969 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC145207.9-201ENST00000623802 325 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 CASC19-212ENST00000641153 1287 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 AL121950.1-201ENST00000624993 2077 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CFAP99D6REC4 CTAGE11P-201ENST00000451540 2353 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CFAP99D6REC4 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AC092111.1-201ENST00000618256 3358 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.54□□□□□ -1.2
CFAP99D6REC4 SALL4P7-201ENST00000555779 3120 ntBASIC7.54□□□□□ -1.2
CFAP99D6REC4 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CFAP99D6REC4 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CFAP99D6REC4 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CFAP99D6REC4 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFAP99D6REC4 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
CFAP99D6REC4 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFAP99D6REC4 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFAP99D6REC4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFAP99D6REC4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CFAP99D6REC4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CFAP99D6REC4 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.53□□□□□ -1.2
CFAP99D6REC4 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CFAP99D6REC4 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms